Waldron et al. Reply to “Commentary on the HMP16SData Bioconductor Package”
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| Published in | American journal of epidemiology Vol. 188; no. 6; pp. 1031 - 1032 |
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| Main Authors | , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
United States
Oxford Publishing Limited (England)
01.06.2019
Oxford University Press |
| Subjects | |
| Online Access | Get full text |
| ISSN | 0002-9262 1476-6256 1476-6256 |
| DOI | 10.1093/aje/kwz008 |
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| Author | Schiffer, Lucas Ramos, Marcel Geistlinger, Ludwig Segata, Nicola Azhar, Rimsha Waldron, Levi |
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| AuthorAffiliation | 2 Institute for Implementation Science in Population Health, City University of New York, New York, New York 4 the Centre for Integrative Biology, University of Trento, Trento, Italy 1 Graduate School of Public Health and Health Policy, City University of New York, New York, New York 3 Roswell Park Cancer Institute, University of Buffalo, Buffalo, New York |
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| Cites_doi | 10.1093/aje/kwz006 10.1056/NEJMp1605378 10.1016/j.chom.2014.08.014 10.1158/0008-5472.CAN-17-0344 10.1038/nmeth.3252 10.1093/nar/gkq1019 10.1093/aje/kwz007 10.1056/NEJMe1516564 10.11610/bmdj.01102 10.1056/NEJMe1705439 10.1038/nmeth.4468 |
| ContentType | Journal Article |
| Copyright | The Author(s) 2019. Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. The Author(s) 2019. Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. 2019 |
| Copyright_xml | – notice: The Author(s) 2019. Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. – notice: The Author(s) 2019. Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. 2019 |
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| References | Longo (2019060220055313800_kwz008C4) 2016; 374 Haug (2019060220055313800_kwz008C8) 2016; 374 Griffith (2019060220055313800_kwz008C1) 2019; 188 Taichman (2019060220055313800_kwz008C5) 2017; 376 Integrative HMP (iHMP) Research Network Consortium (2019060220055313800_kwz008C11) 2014; 16 Pasolli (2019060220055313800_kwz008C10) 2017; 14 Ramos (2019060220055313800_kwz008C12) 2017; 77 Huber (2019060220055313800_kwz008C3) 2015; 12 National Institutes of Health (2019060220055313800_kwz008C6) 2014 Guedj (2019060220055313800_kwz008C7) 2015; 01 Schiffer (2019060220055313800_kwz008C2) 2019; 188 Leinonen (2019060220055313800_kwz008C9) 2011; 39 30649168 - Am J Epidemiol. 2019 Jun 1;188(6):1027-1030. doi: 10.1093/aje/kwz007 30649166 - Am J Epidemiol. 2019 Jun 1;188(6):1023-1026. doi: 10.1093/aje/kwz006 |
| References_xml | – volume: 188 start-page: 1023 issue: 6 year: 2019 ident: 2019060220055313800_kwz008C2 article-title: HMP16SData: efficient access to the Human Microbiome Project through Bioconductor publication-title: Am J Epidemiol doi: 10.1093/aje/kwz006 – year: 2014 ident: 2019060220055313800_kwz008C6 – volume: 374 start-page: 2409 issue: 25 year: 2016 ident: 2019060220055313800_kwz008C8 article-title: From patient to patient—sharing the data from clinical trials publication-title: N Engl J Med doi: 10.1056/NEJMp1605378 – volume: 16 start-page: 276 issue: 3 year: 2014 ident: 2019060220055313800_kwz008C11 article-title: The Integrative Human Microbiome Project: dynamic analysis of microbiome-host omics profiles during periods of human health and disease publication-title: Cell Host Microbe doi: 10.1016/j.chom.2014.08.014 – volume: 77 start-page: e39 issue: 21 year: 2017 ident: 2019060220055313800_kwz008C12 article-title: Software for the integration of multiomics experiments in Bioconductor publication-title: Cancer Res doi: 10.1158/0008-5472.CAN-17-0344 – volume: 12 start-page: 115 issue: 2 year: 2015 ident: 2019060220055313800_kwz008C3 article-title: Orchestrating high-throughput genomic analysis with Bioconductor publication-title: Nat Methods doi: 10.1038/nmeth.3252 – volume: 39 start-page: D19 issue: Database issue year: 2011 ident: 2019060220055313800_kwz008C9 article-title: The Sequence Read Archive publication-title: Nucleic Acids Res doi: 10.1093/nar/gkq1019 – volume: 188 start-page: 1027 issue: 6 year: 2019 ident: 2019060220055313800_kwz008C1 article-title: Invited commentary: improving accessibility of the Human Microbiome Project data through integration with R/Bioconductor publication-title: Am J Epidemiol doi: 10.1093/aje/kwz007 – volume: 374 start-page: 276 issue: 3 year: 2016 ident: 2019060220055313800_kwz008C4 article-title: Data sharing publication-title: N Engl J Med doi: 10.1056/NEJMe1516564 – volume: 01 start-page: 11 issue: 1 year: 2015 ident: 2019060220055313800_kwz008C7 article-title: European Commission Policy on open-access to scientific publications and research data in Horizon 2020 publication-title: Biomed Data J doi: 10.11610/bmdj.01102 – volume: 376 start-page: 2277 issue: 23 year: 2017 ident: 2019060220055313800_kwz008C5 article-title: Data sharing statements for clinical trials—a requirement of the International Committee of Medical Journal Editors publication-title: N Engl J Med doi: 10.1056/NEJMe1705439 – volume: 14 start-page: 1023 issue: 11 year: 2017 ident: 2019060220055313800_kwz008C10 article-title: Accessible, curated metagenomic data through ExperimentHub publication-title: Nat Methods doi: 10.1038/nmeth.4468 – reference: 30649168 - Am J Epidemiol. 2019 Jun 1;188(6):1027-1030. doi: 10.1093/aje/kwz007 – reference: 30649166 - Am J Epidemiol. 2019 Jun 1;188(6):1023-1026. doi: 10.1093/aje/kwz006 |
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| Title | Waldron et al. Reply to “Commentary on the HMP16SData Bioconductor Package” |
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