Mutations in exons 2 and 3 of the FOLR1 gene in demented and non-demented elderly subjects
We have previously reported six novel mutations in the 5'-UTR of the gene for folate receptor-α (FOLR1). In our search for additional mutations we screened patients, referred for investigation of suspected dementia (DGM subgroup) by SSCP and DNA sequencing from the end of exon 1 to the first ba...
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Published in | International journal of molecular medicine Vol. 20; no. 5; pp. 653 - 662 |
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Main Authors | , , |
Format | Journal Article |
Language | English |
Published |
Greece
D.A. Spandidos
01.11.2007
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Online Access | Get full text |
ISSN | 1107-3756 1791-244X 1791-244X |
DOI | 10.3892/ijmm.20.5.653 |
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Abstract | We have previously reported six novel mutations in the 5'-UTR of the gene
for folate receptor-α (FOLR1). In our search for additional mutations we screened
patients, referred for investigation of suspected dementia (DGM subgroup) by SSCP
and DNA sequencing from the end of exon 1 to the first bases of intron 3. We found
4 sequence variations, FOLR1 g.1314G>A, g.1816delC, g.1841G>A, and g.1928C>T.
Pyrosequencing™ genotyping assays were developed for all of them, and 389 active
seniors (AS subgroup) and the 202 DGM patients were genotyped for these mutations.
The frequency q of the mutated allele was, among the AS subjects, 0.068, 0.0026,
0.0026, and 0.024 respectively, and among the DGM subjects, 0.067, 0.0076, 0.0078,
and 0.023. The g.1816delC and g.1841G>A mutations thus were more frequent in
the DGM than in the AS subgroup, but the difference did not reach statistical
significance. The mutated alleles, FOLR1 1816(−) and 1841A, always occurred together
in the same subjects, suggestive of a rare double-mutant haplotype. The two common
polymorphisms, FOLR1 g. 1314G>A and g.1928C>T seemed not to raise tHcy plasma
levels, whereas the double-mutated g.1816(−)-g.1841A haplotype may possibly have
a slight tHcy-raising effect. Thus, so far 8 novel rare FOLR1 mutations with a
combined prevalence of ≈1.3% in Whites as well as two common polymorphisms with
5% and 13%, respectively, have been demonstrated. Only a few of the rare mutations
may potentially be associated with raised plasma tHcy concentrations. No association
with dementia was found. |
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AbstractList | We have previously reported six novel mutations in the 5'-UTR of the gene
for folate receptor-α (FOLR1). In our search for additional mutations we screened
patients, referred for investigation of suspected dementia (DGM subgroup) by SSCP
and DNA sequencing from the end of exon 1 to the first bases of intron 3. We found
4 sequence variations, FOLR1 g.1314G>A, g.1816delC, g.1841G>A, and g.1928C>T.
Pyrosequencing™ genotyping assays were developed for all of them, and 389 active
seniors (AS subgroup) and the 202 DGM patients were genotyped for these mutations.
The frequency q of the mutated allele was, among the AS subjects, 0.068, 0.0026,
0.0026, and 0.024 respectively, and among the DGM subjects, 0.067, 0.0076, 0.0078,
and 0.023. The g.1816delC and g.1841G>A mutations thus were more frequent in
the DGM than in the AS subgroup, but the difference did not reach statistical
significance. The mutated alleles, FOLR1 1816(−) and 1841A, always occurred together
in the same subjects, suggestive of a rare double-mutant haplotype. The two common
polymorphisms, FOLR1 g. 1314G>A and g.1928C>T seemed not to raise tHcy plasma
levels, whereas the double-mutated g.1816(−)-g.1841A haplotype may possibly have
a slight tHcy-raising effect. Thus, so far 8 novel rare FOLR1 mutations with a
combined prevalence of ≈1.3% in Whites as well as two common polymorphisms with
5% and 13%, respectively, have been demonstrated. Only a few of the rare mutations
may potentially be associated with raised plasma tHcy concentrations. No association
with dementia was found. We have previously reported six novel mutations in the 5'-UTR of the gene for folate receptor-alpha (FOLR1). In our search for additional mutations we screened patients, referred for investigation of suspected dementia (DGM subgroup) by SSCP and DNA sequencing from the end of exon 1 to the first bases of intron 3. We found 4 sequence variations, FOLR1 g.1314G>A, g.1816delC, g.1841G>A, and g.1928C>T. Pyrosequencing genotyping assays were developed for all of them, and 389 active seniors (AS subgroup) and the 202 DGM patients were genotyped for these mutations. The frequency q of the mutated allele was, among the AS subjects, 0.068, 0.0026, 0.0026, and 0.024 respectively, and among the DGM subjects, 0.067, 0.0076, 0.0078, and 0.023. The g.1816delC and g.1841G>A mutations thus were more frequent in the DGM than in the AS subgroup, but the difference did not reach statistical significance. The mutated alleles, FOLR1 1816(-) and 1841A, always occurred together in the same subjects, suggestive of a rare double-mutant haplotype. The two common polymorphisms, FOLR1 g. 1314G>A and g.1928C>T seemed not to raise tHcy plasma levels, whereas the double-mutated g.1816(-)-g.1841A haplotype may possibly have a slight tHcy-raising effect. Thus, so far 8 novel rare FOLR1 mutations with a combined prevalence of approximately 1.3% in Whites as well as two common polymorphisms with 5% and 13%, respectively, have been demonstrated. Only a few of the rare mutations may potentially be associated with raised plasma tHcy concentrations. No association with dementia was found.We have previously reported six novel mutations in the 5'-UTR of the gene for folate receptor-alpha (FOLR1). In our search for additional mutations we screened patients, referred for investigation of suspected dementia (DGM subgroup) by SSCP and DNA sequencing from the end of exon 1 to the first bases of intron 3. We found 4 sequence variations, FOLR1 g.1314G>A, g.1816delC, g.1841G>A, and g.1928C>T. Pyrosequencing genotyping assays were developed for all of them, and 389 active seniors (AS subgroup) and the 202 DGM patients were genotyped for these mutations. The frequency q of the mutated allele was, among the AS subjects, 0.068, 0.0026, 0.0026, and 0.024 respectively, and among the DGM subjects, 0.067, 0.0076, 0.0078, and 0.023. The g.1816delC and g.1841G>A mutations thus were more frequent in the DGM than in the AS subgroup, but the difference did not reach statistical significance. The mutated alleles, FOLR1 1816(-) and 1841A, always occurred together in the same subjects, suggestive of a rare double-mutant haplotype. The two common polymorphisms, FOLR1 g. 1314G>A and g.1928C>T seemed not to raise tHcy plasma levels, whereas the double-mutated g.1816(-)-g.1841A haplotype may possibly have a slight tHcy-raising effect. Thus, so far 8 novel rare FOLR1 mutations with a combined prevalence of approximately 1.3% in Whites as well as two common polymorphisms with 5% and 13%, respectively, have been demonstrated. Only a few of the rare mutations may potentially be associated with raised plasma tHcy concentrations. No association with dementia was found. We have previously reported six novel mutations in the 5'-UTR of the gene for folate receptor-alpha (FOLR1). In our search for additional mutations we screened patients, referred for investigation of suspected dementia (DGM subgroup) by SSCP and DNA sequencing from the end of exon 1 to the first bases of intron 3. We found 4 sequence variations, FOLR1 g.1314G>A, g.1816delC, g.1841G>A, and g.1928C>T. Pyrosequencing genotyping assays were developed for all of them, and 389 active seniors (AS subgroup) and the 202 DGM patients were genotyped for these mutations. The frequency q of the mutated allele was, among the AS subjects, 0.068, 0.0026, 0.0026, and 0.024 respectively, and among the DGM subjects, 0.067, 0.0076, 0.0078, and 0.023. The g.1816delC and g.1841G>A mutations thus were more frequent in the DGM than in the AS subgroup, but the difference did not reach statistical significance. The mutated alleles, FOLR1 1816(-) and 1841A, always occurred together in the same subjects, suggestive of a rare double-mutant haplotype. The two common polymorphisms, FOLR1 g. 1314G>A and g.1928C>T seemed not to raise tHcy plasma levels, whereas the double-mutated g.1816(-)-g.1841A haplotype may possibly have a slight tHcy-raising effect. Thus, so far 8 novel rare FOLR1 mutations with a combined prevalence of approximately 1.3% in Whites as well as two common polymorphisms with 5% and 13%, respectively, have been demonstrated. Only a few of the rare mutations may potentially be associated with raised plasma tHcy concentrations. No association with dementia was found. We have previously reported six novel mutations in the 5'-UTR of the gene for folate receptor-alpha (FOLR1). In our search for additional mutations we screened patients, referred for investigation of suspected dementia (DGM subgroup) by SSCP and DNA sequencing from the end of exon 1 to the first bases of intron 3. We found 4 sequence variations, FOLR1 g.1314G>A, g.1816delC, g.1841G>A, and g.1928C>T. Pyrosequencing genotyping assays were developed for all of them, and 389 active seniors (AS subgroup) and the 202 DGM patients were genotyped for these mutations. The frequency q of the mutated allele was, among the AS subjects, 0.068, 0.0026, 0.0026, and 0.024 respectively, and among the DGM subjects, 0.067, 0.0076, 0.0078, and 0.023. The g.1816delC and g.1841G>A mutations thus were more frequent in the DGM than in the AS subgroup, but the difference did not reach statistical significance. The mutated alleles, FOLR1 1816(-) and 1841A, always occurred together in the same subjects, suggestive of a rare double-mutant haplotype. The two common polymorphisms, FOLR1 g. 1314G>A and g.1928C>T seemed not to raise tHcy plasma levels, whereas the double-mutated g.1816(-)-g.1841A haplotype may possibly have a slight tHcy-raising effect. Thus, so far 8 novel rare FOLR1 mutations with a combined prevalence of approximately 1.3% in Whites as well as two common polymorphisms with 5% and 13%, respectively, have been demonstrated. Only a few of the rare mutations may potentially be associated with raised plasma tHcy concentrations. No association with dementia was found. |
Author | Hagnelius, Nils-Olof Böttiger, Anna Nilsson, Torbjörn |
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Snippet | We have previously reported six novel mutations in the 5'-UTR of the gene
for folate receptor-α (FOLR1). In our search for additional mutations we screened... We have previously reported six novel mutations in the 5'-UTR of the gene for folate receptor-alpha (FOLR1). In our search for additional mutations we screened... |
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SubjectTerms | Aged Base Sequence Carrier Proteins - genetics Dementia - genetics Dermatologi och venerologi, klinisk genetik, invärtesmedicin Dermatology and venerology,clinical genetics, internal medicine DNA Mutational Analysis Exons - genetics Female Folate Receptor 1 Folate Receptors, GPI-Anchored Folic Acid - blood Genetic Testing Geriatrics and medical gerontology Geriatrik och medicinsk gerontologi Homocysteine - blood Humans Internal medicine Invärtesmedicin Male MEDICIN MEDICINE Molecular Sequence Data Mutation - genetics Polymorphism, Single Nucleotide - genetics Receptors, Cell Surface - genetics |
Title | Mutations in exons 2 and 3 of the FOLR1 gene in demented and non-demented elderly subjects |
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