An optimized b ‐value sampling for the quantification of interstitial fluid using diffusion‐weighted MRI , a genetic algorithm approach
Multi-b-value diffusion-weighted MRI techniques can simultaneously measure the parenchymal diffusivity, microvascular perfusion, and a third, intermediate diffusion component. This component is related to the interstitial fluid in the brain parenchyma. However, simultaneously estimating three diffus...
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| Published in | Magnetic resonance in medicine Vol. 90; no. 1; pp. 194 - 201 |
|---|---|
| Main Authors | , , , , |
| Format | Journal Article |
| Language | English |
| Published |
United States
Wiley Subscription Services, Inc
01.07.2023
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| Online Access | Get full text |
| ISSN | 0740-3194 1522-2594 1522-2594 |
| DOI | 10.1002/mrm.29612 |
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| Abstract | Multi-b-value diffusion-weighted MRI techniques can simultaneously measure the parenchymal diffusivity, microvascular perfusion, and a third, intermediate diffusion component. This component is related to the interstitial fluid in the brain parenchyma. However, simultaneously estimating three diffusion components from multi-b-value data is difficult and has strong dependence on SNR and chosen b-values. As the number of acquired b-values is limited due to scanning time, it is important to know which b-values are most effective to be included. Therefore, this study evaluates an optimized b-value sampling for interstitial fluid estimation.
The optimized b-value sampling scheme is determined using a genetic algorithm. Subsequently, the performance of this optimized sampling is assessed by comparing it with a linear, logarithmic, and previously proposed sampling scheme, in terms of the RMS error (RMSE) for the intermediate component estimation. The in vivo performance of the optimized sampling is assessed using 7T data with 101 equally spaced b-values ranging from 0 to 1000 s/mm
. In this case, the RMSE was determined by comparing the fit that includes all b-values.
The optimized b-value sampling for estimating the intermediate component was reported to be [0, 30, 90, 210, 280, 350, 580, 620, 660, 680, 720, 760, 980, 990, 1000] s/mm
. For computer simulations, the optimized sampling had a lower RMSE, compared with the other samplings for varying levels of SNR. For the in vivo data, the voxel-wise RMSE of the optimized sampling was lower compared with other sampling schemes.
The genetic algorithm-optimized b-value scheme improves the quantification of the diffusion component related to interstitial fluid in terms of a lower RMSE. |
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| AbstractList | Multi-b-value diffusion-weighted MRI techniques can simultaneously measure the parenchymal diffusivity, microvascular perfusion, and a third, intermediate diffusion component. This component is related to the interstitial fluid in the brain parenchyma. However, simultaneously estimating three diffusion components from multi-b-value data is difficult and has strong dependence on SNR and chosen b-values. As the number of acquired b-values is limited due to scanning time, it is important to know which b-values are most effective to be included. Therefore, this study evaluates an optimized b-value sampling for interstitial fluid estimation.
The optimized b-value sampling scheme is determined using a genetic algorithm. Subsequently, the performance of this optimized sampling is assessed by comparing it with a linear, logarithmic, and previously proposed sampling scheme, in terms of the RMS error (RMSE) for the intermediate component estimation. The in vivo performance of the optimized sampling is assessed using 7T data with 101 equally spaced b-values ranging from 0 to 1000 s/mm
. In this case, the RMSE was determined by comparing the fit that includes all b-values.
The optimized b-value sampling for estimating the intermediate component was reported to be [0, 30, 90, 210, 280, 350, 580, 620, 660, 680, 720, 760, 980, 990, 1000] s/mm
. For computer simulations, the optimized sampling had a lower RMSE, compared with the other samplings for varying levels of SNR. For the in vivo data, the voxel-wise RMSE of the optimized sampling was lower compared with other sampling schemes.
The genetic algorithm-optimized b-value scheme improves the quantification of the diffusion component related to interstitial fluid in terms of a lower RMSE. Multi-b-value diffusion-weighted MRI techniques can simultaneously measure the parenchymal diffusivity, microvascular perfusion, and a third, intermediate diffusion component. This component is related to the interstitial fluid in the brain parenchyma. However, simultaneously estimating three diffusion components from multi-b-value data is difficult and has strong dependence on SNR and chosen b-values. As the number of acquired b-values is limited due to scanning time, it is important to know which b-values are most effective to be included. Therefore, this study evaluates an optimized b-value sampling for interstitial fluid estimation.PURPOSEMulti-b-value diffusion-weighted MRI techniques can simultaneously measure the parenchymal diffusivity, microvascular perfusion, and a third, intermediate diffusion component. This component is related to the interstitial fluid in the brain parenchyma. However, simultaneously estimating three diffusion components from multi-b-value data is difficult and has strong dependence on SNR and chosen b-values. As the number of acquired b-values is limited due to scanning time, it is important to know which b-values are most effective to be included. Therefore, this study evaluates an optimized b-value sampling for interstitial fluid estimation.The optimized b-value sampling scheme is determined using a genetic algorithm. Subsequently, the performance of this optimized sampling is assessed by comparing it with a linear, logarithmic, and previously proposed sampling scheme, in terms of the RMS error (RMSE) for the intermediate component estimation. The in vivo performance of the optimized sampling is assessed using 7T data with 101 equally spaced b-values ranging from 0 to 1000 s/mm2 . In this case, the RMSE was determined by comparing the fit that includes all b-values.METHODThe optimized b-value sampling scheme is determined using a genetic algorithm. Subsequently, the performance of this optimized sampling is assessed by comparing it with a linear, logarithmic, and previously proposed sampling scheme, in terms of the RMS error (RMSE) for the intermediate component estimation. The in vivo performance of the optimized sampling is assessed using 7T data with 101 equally spaced b-values ranging from 0 to 1000 s/mm2 . In this case, the RMSE was determined by comparing the fit that includes all b-values.The optimized b-value sampling for estimating the intermediate component was reported to be [0, 30, 90, 210, 280, 350, 580, 620, 660, 680, 720, 760, 980, 990, 1000] s/mm2 . For computer simulations, the optimized sampling had a lower RMSE, compared with the other samplings for varying levels of SNR. For the in vivo data, the voxel-wise RMSE of the optimized sampling was lower compared with other sampling schemes.RESULTSThe optimized b-value sampling for estimating the intermediate component was reported to be [0, 30, 90, 210, 280, 350, 580, 620, 660, 680, 720, 760, 980, 990, 1000] s/mm2 . For computer simulations, the optimized sampling had a lower RMSE, compared with the other samplings for varying levels of SNR. For the in vivo data, the voxel-wise RMSE of the optimized sampling was lower compared with other sampling schemes.The genetic algorithm-optimized b-value scheme improves the quantification of the diffusion component related to interstitial fluid in terms of a lower RMSE.CONCLUSIONThe genetic algorithm-optimized b-value scheme improves the quantification of the diffusion component related to interstitial fluid in terms of a lower RMSE. PurposeMulti‐b‐value diffusion‐weighted MRI techniques can simultaneously measure the parenchymal diffusivity, microvascular perfusion, and a third, intermediate diffusion component. This component is related to the interstitial fluid in the brain parenchyma. However, simultaneously estimating three diffusion components from multi‐b‐value data is difficult and has strong dependence on SNR and chosen b‐values. As the number of acquired b‐values is limited due to scanning time, it is important to know which b‐values are most effective to be included. Therefore, this study evaluates an optimized b‐value sampling for interstitial fluid estimation.MethodThe optimized b‐value sampling scheme is determined using a genetic algorithm. Subsequently, the performance of this optimized sampling is assessed by comparing it with a linear, logarithmic, and previously proposed sampling scheme, in terms of the RMS error (RMSE) for the intermediate component estimation. The in vivo performance of the optimized sampling is assessed using 7T data with 101 equally spaced b‐values ranging from 0 to 1000 s/mm2. In this case, the RMSE was determined by comparing the fit that includes all b‐values.ResultsThe optimized b‐value sampling for estimating the intermediate component was reported to be [0, 30, 90, 210, 280, 350, 580, 620, 660, 680, 720, 760, 980, 990, 1000] s/mm2. For computer simulations, the optimized sampling had a lower RMSE, compared with the other samplings for varying levels of SNR. For the in vivo data, the voxel‐wise RMSE of the optimized sampling was lower compared with other sampling schemes.ConclusionThe genetic algorithm–optimized b‐value scheme improves the quantification of the diffusion component related to interstitial fluid in terms of a lower RMSE. Click here for author‐reader discussions |
| Author | Voorter, Paulien H. M. Drenthen, Gerhard S. Jansen, Jacobus F. A. van der Thiel, Merel M. Backes, Walter H. |
| Author_xml | – sequence: 1 givenname: Gerhard S. orcidid: 0000-0002-7708-8501 surname: Drenthen fullname: Drenthen, Gerhard S. organization: Department of Radiology and Nuclear Medicine Maastricht University Medical Center Maastricht The Netherlands, School for Mental Health and Neuroscience Maastricht University Medical Center Maastricht The Netherlands – sequence: 2 givenname: Jacobus F. A. orcidid: 0000-0002-5271-8060 surname: Jansen fullname: Jansen, Jacobus F. A. organization: Department of Radiology and Nuclear Medicine Maastricht University Medical Center Maastricht The Netherlands, School for Mental Health and Neuroscience Maastricht University Medical Center Maastricht The Netherlands, Department of Electrical Engineering Eindhoven University of Technology Eindhoven The Netherlands – sequence: 3 givenname: Merel M. surname: van der Thiel fullname: van der Thiel, Merel M. organization: Department of Radiology and Nuclear Medicine Maastricht University Medical Center Maastricht The Netherlands, School for Mental Health and Neuroscience Maastricht University Medical Center Maastricht The Netherlands – sequence: 4 givenname: Paulien H. M. orcidid: 0000-0002-2724-4502 surname: Voorter fullname: Voorter, Paulien H. M. organization: Department of Radiology and Nuclear Medicine Maastricht University Medical Center Maastricht The Netherlands, School for Mental Health and Neuroscience Maastricht University Medical Center Maastricht The Netherlands – sequence: 5 givenname: Walter H. orcidid: 0000-0001-7905-0681 surname: Backes fullname: Backes, Walter H. organization: Department of Radiology and Nuclear Medicine Maastricht University Medical Center Maastricht The Netherlands, School for Mental Health and Neuroscience Maastricht University Medical Center Maastricht The Netherlands |
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| CitedBy_id | crossref_primary_10_1016_j_mri_2023_10_003 crossref_primary_10_1016_j_compbiomed_2024_108508 crossref_primary_10_1002_nbm_5162 crossref_primary_10_1002_jmri_29377 crossref_primary_10_1016_j_nic_2024_11_001 |
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for author‐reader discussions Multi-b-value diffusion-weighted MRI techniques can simultaneously measure the parenchymal diffusivity, microvascular perfusion, and a third, intermediate... PurposeMulti‐b‐value diffusion‐weighted MRI techniques can simultaneously measure the parenchymal diffusivity, microvascular perfusion, and a third,... |
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| SubjectTerms | Algorithms Brain - diagnostic imaging Computer Simulation Diffusion Diffusion Magnetic Resonance Imaging - methods Estimation Extracellular Fluid - diagnostic imaging Genetic algorithms Magnetic resonance imaging Mathematical models Microvasculature Parenchyma Root-mean-square errors Sampling |
| Title | An optimized b ‐value sampling for the quantification of interstitial fluid using diffusion‐weighted MRI , a genetic algorithm approach |
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