Picosecond Dynamics of CN - -Ligated Ferric Cytochrome c after Photoexcitation Using Time-resolved Vibrational Spectroscopy

The dynamics of the CN‒-ligated ferric cytochrome c (CytcCN) in D2O at 283 K following Q-band photoexcitation at 575 nm was observed using femtosecond time-resolved vibrational spectroscopy. The equilibrium vibrational spectrum of the CN stretching mode of CytcCN shows two overlapping bands: one mai...

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Published inBulletin of the Korean Chemical Society Vol. 31; no. 12; pp. 3771 - 3776
Main Authors Kim, Joo-Young, Park, Jae-Heung, Chowdhury, Salina A., Lim, Man-Ho
Format Journal Article
LanguageEnglish
Published 대한화학회 20.12.2010
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ISSN0253-2964
1229-5949
DOI10.5012/bkcs.2010.31.12.3771

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Abstract The dynamics of the CN‒-ligated ferric cytochrome c (CytcCN) in D2O at 283 K following Q-band photoexcitation at 575 nm was observed using femtosecond time-resolved vibrational spectroscopy. The equilibrium vibrational spectrum of the CN stretching mode of CytcCN shows two overlapping bands: one main band (82%) at 2122 cm‒1 with 23 cm‒1 full width at half maximum (fwhm) and the other band (18%) at 2116 cm‒1 with 7 cm‒1 fwhm. The timeresolved spectra show bleaching of the CN fundamental mode of CytcCN and two bsorption features at lower energies.The bleach signal and both absorption features are all formed within the time resolution of the experiment (< 200 fs) and decay with a life time of 1.9 ps. One transient absorption feature, appearing immediately red to the bleach signal, results from the thermal excitation of low-frequency modes of the heme that anharmonically couple to the CN fundamental mode, thereby shifting the CN mode to lower energies. The shift of the CN mode decays with a lifetime of 2 ps, equivalent to the time scale for vibrational cooling of the low-frequency heme modes. The other transient absorption feature, which is 3.3 times weaker than the bleach signal and shifted 27 cm‒1 toward lower energies, is attributed to the CN mode in an electronically excited state where the CN bond is weakened with a lowered extinction coefficient. These observations suggest that photoexcited CytcCN mainly undergoes ultrafast radiationless relaxation, causing photo-deligation of CN‒ from CytcCN highly inefficient. As also observed in CN‒-ligated myoglobin, inefficient ligand photodissociation might be a general property of CN‒-ligated ferric hemes. KCI Citation Count: 8
AbstractList The dynamics of the CN‒-ligated ferric cytochrome c (CytcCN) in D2O at 283 K following Q-band photoexcitation at 575 nm was observed using femtosecond time-resolved vibrational spectroscopy. The equilibrium vibrational spectrum of the CN stretching mode of CytcCN shows two overlapping bands: one main band (82%) at 2122 cm‒1 with 23 cm‒1 full width at half maximum (fwhm) and the other band (18%) at 2116 cm‒1 with 7 cm‒1 fwhm. The timeresolved spectra show bleaching of the CN fundamental mode of CytcCN and two bsorption features at lower energies.The bleach signal and both absorption features are all formed within the time resolution of the experiment (< 200 fs) and decay with a life time of 1.9 ps. One transient absorption feature, appearing immediately red to the bleach signal, results from the thermal excitation of low-frequency modes of the heme that anharmonically couple to the CN fundamental mode, thereby shifting the CN mode to lower energies. The shift of the CN mode decays with a lifetime of 2 ps, equivalent to the time scale for vibrational cooling of the low-frequency heme modes. The other transient absorption feature, which is 3.3 times weaker than the bleach signal and shifted 27 cm‒1 toward lower energies, is attributed to the CN mode in an electronically excited state where the CN bond is weakened with a lowered extinction coefficient. These observations suggest that photoexcited CytcCN mainly undergoes ultrafast radiationless relaxation, causing photo-deligation of CN‒ from CytcCN highly inefficient. As also observed in CN‒-ligated myoglobin, inefficient ligand photodissociation might be a general property of CN‒-ligated ferric hemes. KCI Citation Count: 8
Author Kim, Joo-Young
Park, Jae-Heung
Chowdhury, Salina A.
Lim, Man-Ho
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Cites_doi 10.1021/bi00174a029
10.1021/bi00695a021
10.1016/0014-5793(77)80927-7
10.1021/bi00060a011
10.1021/cr00027a007
10.1021/bi952596m
10.1016/0301-0104(91)87080-F
10.1021/ja057172m
10.5012/bkcs.2009.30.1.177
10.1364/OL.25.001798
10.1021/jp0559377
10.1021/jp0489020
10.1529/biophysj.103.036236
10.1063/1.473392
10.1063/1.474216
10.1073/pnas.80.1.173
10.1021/ja042365f
10.1016/0301-4622(87)80034-0
10.1021/j100830a521
10.1126/science.278.5337.443
10.1007/s00775-001-0334-y
10.1002/cphc.200700042
10.1073/pnas.78.12.7526
10.1016/S0022-2836(83)80094-1
10.1021/bi961889s
10.1021/jp0662698
10.1021/jp804656t
10.1021/bi00411a022
10.1073/pnas.85.14.5062
10.1021/ja035475f
10.1016/S0006-3495(93)81445-0
10.1016/S0006-3495(99)76959-6
10.1021/bi00230a025
10.1021/jp9536458
10.1007/s00775-008-0357-8
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References key-10.5012/bkcs.2010.31.12.3771-26
key-10.5012/bkcs.2010.31.12.3771-24
key-10.5012/bkcs.2010.31.12.3771-25
key-10.5012/bkcs.2010.31.12.3771-22
key-10.5012/bkcs.2010.31.12.3771-23
key-10.5012/bkcs.2010.31.12.3771-20
key-10.5012/bkcs.2010.31.12.3771-42
key-10.5012/bkcs.2010.31.12.3771-21
key-10.5012/bkcs.2010.31.12.3771-40
key-10.5012/bkcs.2010.31.12.3771-41
key-10.5012/bkcs.2010.31.12.3771-19
key-10.5012/bkcs.2010.31.12.3771-39
key-10.5012/bkcs.2010.31.12.3771-18
key-10.5012/bkcs.2010.31.12.3771-15
key-10.5012/bkcs.2010.31.12.3771-37
key-10.5012/bkcs.2010.31.12.3771-38
key-10.5012/bkcs.2010.31.12.3771-5
key-10.5012/bkcs.2010.31.12.3771-13
key-10.5012/bkcs.2010.31.12.3771-35
key-10.5012/bkcs.2010.31.12.3771-4
key-10.5012/bkcs.2010.31.12.3771-14
key-10.5012/bkcs.2010.31.12.3771-36
key-10.5012/bkcs.2010.31.12.3771-7
key-10.5012/bkcs.2010.31.12.3771-11
key-10.5012/bkcs.2010.31.12.3771-33
key-10.5012/bkcs.2010.31.12.3771-6
key-10.5012/bkcs.2010.31.12.3771-12
key-10.5012/bkcs.2010.31.12.3771-9
key-10.5012/bkcs.2010.31.12.3771-31
key-10.5012/bkcs.2010.31.12.3771-8
key-10.5012/bkcs.2010.31.12.3771-10
key-10.5012/bkcs.2010.31.12.3771-32
key-10.5012/bkcs.2010.31.12.3771-30
key-10.5012/bkcs.2010.31.12.3771-3
key-10.5012/bkcs.2010.31.12.3771-2
References_xml – ident: key-10.5012/bkcs.2010.31.12.3771-12
  doi: 10.1021/bi00174a029
– ident: key-10.5012/bkcs.2010.31.12.3771-2
  doi: 10.1021/bi00695a021
– ident: key-10.5012/bkcs.2010.31.12.3771-30
  doi: 10.1016/0014-5793(77)80927-7
– ident: key-10.5012/bkcs.2010.31.12.3771-6
  doi: 10.1021/bi00060a011
– ident: key-10.5012/bkcs.2010.31.12.3771-4
  doi: 10.1021/cr00027a007
– ident: key-10.5012/bkcs.2010.31.12.3771-19
  doi: 10.1021/bi952596m
– ident: key-10.5012/bkcs.2010.31.12.3771-41
  doi: 10.1016/0301-0104(91)87080-F
– ident: key-10.5012/bkcs.2010.31.12.3771-13
  doi: 10.1021/ja057172m
– ident: key-10.5012/bkcs.2010.31.12.3771-31
  doi: 10.5012/bkcs.2009.30.1.177
– ident: key-10.5012/bkcs.2010.31.12.3771-32
  doi: 10.1364/OL.25.001798
– ident: key-10.5012/bkcs.2010.31.12.3771-21
  doi: 10.1021/jp0559377
– ident: key-10.5012/bkcs.2010.31.12.3771-9
  doi: 10.1021/jp0489020
– ident: key-10.5012/bkcs.2010.31.12.3771-15
  doi: 10.1529/biophysj.103.036236
– ident: key-10.5012/bkcs.2010.31.12.3771-36
  doi: 10.1063/1.473392
– ident: key-10.5012/bkcs.2010.31.12.3771-42
  doi: 10.1063/1.474216
– ident: key-10.5012/bkcs.2010.31.12.3771-10
  doi: 10.1073/pnas.80.1.173
– ident: key-10.5012/bkcs.2010.31.12.3771-14
  doi: 10.1021/ja042365f
– ident: key-10.5012/bkcs.2010.31.12.3771-5
  doi: 10.1016/0301-4622(87)80034-0
– ident: key-10.5012/bkcs.2010.31.12.3771-33
  doi: 10.1021/j100830a521
– ident: key-10.5012/bkcs.2010.31.12.3771-37
  doi: 10.1126/science.278.5337.443
– ident: key-10.5012/bkcs.2010.31.12.3771-23
  doi: 10.1007/s00775-001-0334-y
– ident: key-10.5012/bkcs.2010.31.12.3771-25
  doi: 10.1002/cphc.200700042
– ident: key-10.5012/bkcs.2010.31.12.3771-7
  doi: 10.1073/pnas.78.12.7526
– ident: key-10.5012/bkcs.2010.31.12.3771-8
  doi: 10.1016/S0022-2836(83)80094-1
– ident: key-10.5012/bkcs.2010.31.12.3771-20
  doi: 10.1021/bi961889s
– ident: key-10.5012/bkcs.2010.31.12.3771-26
  doi: 10.1021/jp0662698
– ident: key-10.5012/bkcs.2010.31.12.3771-3
  doi: 10.1021/jp804656t
– ident: key-10.5012/bkcs.2010.31.12.3771-18
  doi: 10.1021/bi00411a022
– ident: key-10.5012/bkcs.2010.31.12.3771-38
  doi: 10.1073/pnas.85.14.5062
– ident: key-10.5012/bkcs.2010.31.12.3771-40
  doi: 10.1021/ja035475f
– ident: key-10.5012/bkcs.2010.31.12.3771-39
  doi: 10.1016/S0006-3495(93)81445-0
– ident: key-10.5012/bkcs.2010.31.12.3771-22
  doi: 10.1016/S0006-3495(99)76959-6
– ident: key-10.5012/bkcs.2010.31.12.3771-11
  doi: 10.1021/bi00230a025
– ident: key-10.5012/bkcs.2010.31.12.3771-35
  doi: 10.1021/jp9536458
– ident: key-10.5012/bkcs.2010.31.12.3771-24
  doi: 10.1007/s00775-008-0357-8
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Snippet The dynamics of the CN‒-ligated ferric cytochrome c (CytcCN) in D2O at 283 K following Q-band photoexcitation at 575 nm was observed using femtosecond...
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Title Picosecond Dynamics of CN - -Ligated Ferric Cytochrome c after Photoexcitation Using Time-resolved Vibrational Spectroscopy
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