Reproducible image-based profiling with Pycytominer - Serrano, Erik; Chandrasekaran, Srinivas Niranj; Bunten, Dave; Brewer, Kenneth I.; Tomkinson, Jenna; Kern, Roshan; Bornholdt, Michael; Fleming, Stephen J.; Pei, Ruifan; Arevalo, John; Tsang, Hillary; Rubinetti, Vincent; et al. (Nature methods, 2025)
Keywords: 631/114/1305; 631/114/2163; 631/114/794; Algorithms; Application programming interface; Bioinformatics; Biological Microscopy; Biological Techniques; Biomedical and Life Sciences; Biomedical Engineering/Biotechnology; Brief Communication; Communication; Computational Biology - methods; Datasets; Deep learning; Feature selection; Humans; Image acquisition; Image analysis; Image processing; Image Processing, Computer-Assisted - methods; Injuries; Kinases; Life Sciences; Machine Learning; Microscopy; Microscopy - methods; Morphology; Open source software; Proteomics; Python; Reproducibility of Results; Single-Cell Analysis - methods; Software