Deep Learning-Based Tract Classification of Preoperative DWI Tractography Advances the Prediction of Short-Term Postoperative Language Improvement in Children With Drug-Resistant Epilepsy
Objective: To develop an innovative deep convolutional neural network (DCNN)-based tract classification to enhance the prediction of short-term postoperative language improvement using axonal connectivity markers derived from specific language modular networks (LMNs) within the preoperative whole-br...
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| Published in | IEEE transactions on biomedical engineering Vol. 72; no. 2; pp. 565 - 576 |
|---|---|
| Main Authors | , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
United States
IEEE
01.02.2025
The Institute of Electrical and Electronics Engineers, Inc. (IEEE) |
| Subjects | |
| Online Access | Get full text |
| ISSN | 0018-9294 1558-2531 1558-2531 |
| DOI | 10.1109/TBME.2024.3463481 |
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| Abstract | Objective: To develop an innovative deep convolutional neural network (DCNN)-based tract classification to enhance the prediction of short-term postoperative language improvement using axonal connectivity markers derived from specific language modular networks (LMNs) within the preoperative whole-brain diffusion-weighted imaging connectome (wDWIC). Methods: We employed a three-step approach. First, our previous DCNN-based tract classification to detect true-positive eloquent tracts was extended using an open-source database of high-quality wDWIC to facilitate the accurate classification of true-positive tracts within the preoperative backbone wDWIC of individual patients. Next, we applied psychometry-driven DWIC analysis to the resulting DCNN-based backbone wDWIC in order to create core, expressive, and receptive LMNs. Finally, graph and circuit theory-based connectivity markers were assessed within the three LMNs and compared using a series of machine learning algorithms to predict the presence of postoperative language improvement from a given LMN. Results: The results showed that the extended DCNN tract classification significantly improved the reproducibility of connectivity markers by up to 35.5<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula> of F-statistics across different LMNs. The prediction accuracy increased by up to 40<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula> across different machine learning algorithms. Notably, the best algorithm achieved the accuracy of 96<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula>/94<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula>/96<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula> to predict the presence of language improvement about two months after surgery in core/expressive/receptive domain of an independent validation cohort. Conclusion: These domains hold great potential to assist physicians in identifying candidates whose language skills stand to benefit from early surgery. Significance: DCNN tract classification may be an effective tool to improve predicting short-term postoperative language improvement in pediatric epilepsy surgery. |
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| AbstractList | To develop an innovative deep convolutional neural network (DCNN)-based tract classification to enhance the prediction of short-term postoperative language improvement using axonal connectivity markers derived from specific language modular networks (LMNs) within the preoperative whole-brain diffusion-weighted imaging connectome (wDWIC).
We employed a three-step approach. First, our previous DCNN-based tract classification to detect true-positive eloquent tracts was extended using an open-source database of high-quality wDWIC to facilitate the accurate classification of true-positive tracts within the preoperative backbone wDWIC of individual patients. Next, we applied psychometry-driven DWIC analysis to the resulting DCNN-based backbone wDWIC in order to create core, expressive, and receptive LMNs. Finally, graph and circuit theory-based connectivity markers were assessed within the three LMNs and compared using a series of machine learning algorithms to predict the presence of postoperative language improvement from a given LMN.
The results showed that the extended DCNN tract classification significantly improved the reproducibility of connectivity markers by up to 35.5 of F-statistics across different LMNs. The prediction accuracy increased by up to 40 across different machine learning algorithms. Notably, the best algorithm achieved the accuracy of 96/94/96 to predict the presence of language improvement about two months after surgery in core/expressive/receptive domain of an independent validation cohort.
These domains hold great potential to assist physicians in identifying candidates whose language skills stand to benefit from early surgery.
DCNN tract classification may be an effective tool to improve predicting short-term postoperative language improvement in pediatric epilepsy surgery. To develop an innovative deep convolutional neural network (DCNN)-based tract classification to enhance the prediction of short-term postoperative language improvement using axonal connectivity markers derived from specific language modular networks (LMNs) within the preoperative whole-brain diffusion-weighted imaging connectome (wDWIC).OBJECTIVETo develop an innovative deep convolutional neural network (DCNN)-based tract classification to enhance the prediction of short-term postoperative language improvement using axonal connectivity markers derived from specific language modular networks (LMNs) within the preoperative whole-brain diffusion-weighted imaging connectome (wDWIC).We employed a three-step approach. First, our previous DCNN-based tract classification to detect true-positive eloquent tracts was extended using an open-source database of high-quality wDWIC to facilitate the accurate classification of true-positive tracts within the preoperative backbone wDWIC of individual patients. Next, we applied psychometry-driven DWIC analysis to the resulting DCNN-based backbone wDWIC in order to create core, expressive, and receptive LMNs. Finally, graph and circuit theory-based connectivity markers were assessed within the three LMNs and compared using a series of machine learning algorithms to predict the presence of postoperative language improvement from a given LMN.METHODSWe employed a three-step approach. First, our previous DCNN-based tract classification to detect true-positive eloquent tracts was extended using an open-source database of high-quality wDWIC to facilitate the accurate classification of true-positive tracts within the preoperative backbone wDWIC of individual patients. Next, we applied psychometry-driven DWIC analysis to the resulting DCNN-based backbone wDWIC in order to create core, expressive, and receptive LMNs. Finally, graph and circuit theory-based connectivity markers were assessed within the three LMNs and compared using a series of machine learning algorithms to predict the presence of postoperative language improvement from a given LMN.The results showed that the extended DCNN tract classification significantly improved the reproducibility of connectivity markers by up to 35.5 of F-statistics across different LMNs. The prediction accuracy increased by up to 40 across different machine learning algorithms. Notably, the best algorithm achieved the accuracy of 96/94/96 to predict the presence of language improvement about two months after surgery in core/expressive/receptive domain of an independent validation cohort.RESULTSThe results showed that the extended DCNN tract classification significantly improved the reproducibility of connectivity markers by up to 35.5 of F-statistics across different LMNs. The prediction accuracy increased by up to 40 across different machine learning algorithms. Notably, the best algorithm achieved the accuracy of 96/94/96 to predict the presence of language improvement about two months after surgery in core/expressive/receptive domain of an independent validation cohort.These domains hold great potential to assist physicians in identifying candidates whose language skills stand to benefit from early surgery.CONCLUSIONThese domains hold great potential to assist physicians in identifying candidates whose language skills stand to benefit from early surgery.DCNN tract classification may be an effective tool to improve predicting short-term postoperative language improvement in pediatric epilepsy surgery.SIGNIFICANCEDCNN tract classification may be an effective tool to improve predicting short-term postoperative language improvement in pediatric epilepsy surgery. Objective: To develop an innovative deep convolutional neural network (DCNN)-based tract classification to enhance the prediction of short-term postoperative language improvement using axonal connectivity markers derived from specific language modular networks (LMNs) within the preoperative whole-brain diffusion-weighted imaging connectome (wDWIC). Methods: We employed a three-step approach. First, our previous DCNN-based tract classification to detect true-positive eloquent tracts was extended using an open-source database of high-quality wDWIC to facilitate the accurate classification of true-positive tracts within the preoperative backbone wDWIC of individual patients. Next, we applied psychometry-driven DWIC analysis to the resulting DCNN-based backbone wDWIC in order to create core, expressive, and receptive LMNs. Finally, graph and circuit theory-based connectivity markers were assessed within the three LMNs and compared using a series of machine learning algorithms to predict the presence of postoperative language improvement from a given LMN. Results: The results showed that the extended DCNN tract classification significantly improved the reproducibility of connectivity markers by up to 35.5<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula> of F-statistics across different LMNs. The prediction accuracy increased by up to 40<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula> across different machine learning algorithms. Notably, the best algorithm achieved the accuracy of 96<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula>/94<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula>/96<inline-formula><tex-math notation="LaTeX">\%</tex-math></inline-formula> to predict the presence of language improvement about two months after surgery in core/expressive/receptive domain of an independent validation cohort. Conclusion: These domains hold great potential to assist physicians in identifying candidates whose language skills stand to benefit from early surgery. Significance: DCNN tract classification may be an effective tool to improve predicting short-term postoperative language improvement in pediatric epilepsy surgery. Objective: To develop an innovative deep convolutional neural network (DCNN)-based tract classification to enhance the prediction of short-term postoperative language improvement using axonal connectivity markers derived from specific language modular networks (LMNs) within the preoperative whole-brain diffusion-weighted imaging connectome (wDWIC). Methods: We employed a three-step approach. First, our previous DCNN-based tract classification to detect true-positive eloquent tracts was extended using an open-source database of high-quality wDWIC to facilitate the accurate classification of true-positive tracts within the preoperative backbone wDWIC of individual patients. Next, we applied psychometry-driven DWIC analysis to the resulting DCNN-based backbone wDWIC in order to create core, expressive, and receptive LMNs. Finally, graph and circuit theory-based connectivity markers were assessed within the three LMNs and compared using a series of machine learning algorithms to predict the presence of postoperative language improvement from a given LMN. Results: The results showed that the extended DCNN tract classification significantly improved the reproducibility of connectivity markers by up to 35.5[Formula Omitted] of F-statistics across different LMNs. The prediction accuracy increased by up to 40[Formula Omitted] across different machine learning algorithms. Notably, the best algorithm achieved the accuracy of 96[Formula Omitted]/94[Formula Omitted]/96[Formula Omitted] to predict the presence of language improvement about two months after surgery in core/expressive/receptive domain of an independent validation cohort. Conclusion: These domains hold great potential to assist physicians in identifying candidates whose language skills stand to benefit from early surgery. Significance: DCNN tract classification may be an effective tool to improve predicting short-term postoperative language improvement in pediatric epilepsy surgery. |
| Author | Dong, Ming Jeong, Jeong-Won Uda, Hiroshi Lee, Min-Hee Rothermel, Robert Carlson, Alanna Banerjee, Soumyanil Juhasz, Csaba Asano, Eishi |
| Author_xml | – sequence: 1 givenname: Min-Hee orcidid: 0000-0002-1932-9557 surname: Lee fullname: Lee, Min-Hee organization: Department of Pediatrics, Wayne State University School of Medicine, USA – sequence: 2 givenname: Soumyanil orcidid: 0000-0003-4165-8637 surname: Banerjee fullname: Banerjee, Soumyanil organization: Department of Computer Science, Wayne State University School of Engineering, USA – sequence: 3 givenname: Hiroshi orcidid: 0000-0002-7814-697X surname: Uda fullname: Uda, Hiroshi organization: Department of Pediatrics, Wayne State University School of Medicine, USA – sequence: 4 givenname: Alanna surname: Carlson fullname: Carlson, Alanna organization: Department of Pediatrics, Wayne State University School of Medicine, USA – sequence: 5 givenname: Ming orcidid: 0000-0001-8133-7809 surname: Dong fullname: Dong, Ming organization: Department of Computer Science, Wayne State University School of Engineering, USA – sequence: 6 givenname: Robert surname: Rothermel fullname: Rothermel, Robert organization: Department of Psychiatry, Wayne State University School of Medicine, and Children's Hospital of Michigan, USA – sequence: 7 givenname: Csaba orcidid: 0000-0002-5067-5554 surname: Juhasz fullname: Juhasz, Csaba organization: Departments of Pediatrics, Neurology, and Translational Neuroscience Program, Wayne State University School of Medicine, USA – sequence: 8 givenname: Eishi orcidid: 0000-0001-8391-4067 surname: Asano fullname: Asano, Eishi organization: Departments of Pediatrics, Neurology, and Translational Neuroscience Program, Wayne State University School of Medicine, USA – sequence: 9 givenname: Jeong-Won orcidid: 0000-0003-4498-0939 surname: Jeong fullname: Jeong, Jeong-Won email: jjeong@med.wayne.edu organization: Departments of Pediatrics, Neurology, and Translational Neuroscience Program, Wayne State University School of Medicine, Detroit, MI, USA |
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| SubjectTerms | Adolescent Algorithms Artificial neural networks Brain - diagnostic imaging Child Child, Preschool Classification Connectome - methods Deep convolutional neural network Deep Learning Diffusion Tensor Imaging - methods Drug resistance Drug Resistant Epilepsy - diagnostic imaging Drug Resistant Epilepsy - surgery Epilepsy Female Graph theory Humans Image Interpretation, Computer-Assisted - methods Language Learning algorithms Machine learning Machine learning algorithms Magnetic resonance imaging Male network connectivity marker Neural networks Neuroimaging pediatric epilepsy surgery Pediatrics Postoperative Period prediction of language improvement Predictions psychometry-driven language modular network Reproducibility of results Statistical analysis Surgery Surgical instruments |
| Title | Deep Learning-Based Tract Classification of Preoperative DWI Tractography Advances the Prediction of Short-Term Postoperative Language Improvement in Children With Drug-Resistant Epilepsy |
| URI | https://ieeexplore.ieee.org/document/10683963 https://www.ncbi.nlm.nih.gov/pubmed/39292577 https://www.proquest.com/docview/3158198687 https://www.proquest.com/docview/3106732548 |
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