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Integrating deep learning with microfluidics for biophysical classification of sickle red blood cells adhered to laminin
Praljak, Niksa, Iram, Shamreen, Goreke, Utku, Singh, Gundeep, Hill, Ailis, Gurkan, Umut A., Hinczewski, Michael
Published in PLoS computational biology (01.11.2021)
Published in PLoS computational biology (01.11.2021)
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Journal Article
Self-Sensing Cavitation Detection for Pulsed Cavitational Ultrasound Therapy
Magnier, Clara, Kwiecinski, Wojciech, Escudero, Daniel Suarez, Garcia, Suxer Alfonso, Vacher, Elise, Delplanque, Maurice, Messas, Emmanuel, Pernot, Mathieu
Published in IEEE transactions on biomedical engineering (01.01.2025)
Published in IEEE transactions on biomedical engineering (01.01.2025)
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Journal Article
Digital image enhancement using deep learning algorithm in 3D heads-up vitreoretinal surgery
Hwang, Sung Ha, Kim, Young Jae, Cho, Jae Bok, Kim, Kwang Gi, Nam, Dong Heun
Published in Scientific reports (26.05.2025)
Published in Scientific reports (26.05.2025)
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Journal Article
Analysis of follicular fluid and serum markers of oxidative stress in women with unexplained infertility by Raman and machine learning methods
Depciuch, Joanna, Paja, Wiesław, Pancerz, Krzysztof, Uzun, Özgur, Bulut, Huri, Tarhan, Nevzat, Guleken, Zozan
Published in Journal of Raman spectroscopy (01.05.2023)
Published in Journal of Raman spectroscopy (01.05.2023)
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Journal Article
CHANGE-seq reveals genetic and epigenetic effects on CRISPR–Cas9 genome-wide activity
Lazzarotto, Cicera R., Malinin, Nikolay L., Li, Yichao, Zhang, Ruochi, Yang, Yang, Lee, GaHyun, Cowley, Eleanor, He, Yanghua, Lan, Xin, Jividen, Kasey, Katta, Varun, Kolmakova, Natalia G., Petersen, Christopher T., Qi, Qian, Strelcov, Evgheni, Maragh, Samantha, Krenciute, Giedre, Ma, Jian, Cheng, Yong, Tsai, Shengdar Q.
Published in Nature biotechnology (01.11.2020)
Published in Nature biotechnology (01.11.2020)
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Journal Article
Machine learning utilising spectral derivative data improves cellular health classification through hyperspectral infra-red spectroscopy
Mellors, Ben O. L., Spear, Abigail M., Howle, Christopher R., Curtis, Kelly, Macildowie, Sara, Dehghani, Hamid
Published in PloS one (15.09.2020)
Published in PloS one (15.09.2020)
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Journal Article
Deep Learning for Drug Discovery and Cancer Research: Automated Analysis of Vascularization Images
Urban, Gregor, Bache, Kevin, Phan, Duc T. T., Sobrino, Agua, Shmakov, Alexander K., Hachey, Stephanie J., Hughes, Christopher C. W., Baldi, Pierre
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.05.2019)
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.05.2019)
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Journal Article
Enhancing Clinical Translation of Cancer Using Nanoinformatics
Soltani, Madjid, Moradi Kashkooli, Farshad, Souri, Mohammad, Zare Harofte, Samaneh, Harati, Tina, Khadem, Atefeh, Haeri Pour, Mohammad, Raahemifar, Kaamran
Published in Cancers (19.05.2021)
Published in Cancers (19.05.2021)
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Journal Article
Integrative computational approach identifies immune‐relevant biomarkers in ulcerative colitis
He, Tianzhen, Wang, Kai, Zhao, Peng, Zhu, Guanqun, Yin, Xinbao, Zhang, Yulian, Zhang, Zongliang, Zhao, Kai, Wang, Zhenlin, Wang, Ke
Published in FEBS open bio (01.02.2022)
Published in FEBS open bio (01.02.2022)
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Journal Article
Machine learning-based classification of mitochondrial morphology in primary neurons and brain
Fogo, Garrett M., Anzell, Anthony R., Maheras, Kathleen J., Raghunayakula, Sarita, Wider, Joseph M., Emaus, Katlynn J., Bryson, Timothy D., Bukowski, Melissa J., Neumar, Robert W., Przyklenk, Karin, Sanderson, Thomas H.
Published in Scientific reports (04.03.2021)
Published in Scientific reports (04.03.2021)
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Journal Article
Machine learning guided aptamer refinement and discovery
Bashir, Ali, Yang, Qin, Wang, Jinpeng, Hoyer, Stephan, Chou, Wenchuan, McLean, Cory, Davis, Geoff, Gong, Qiang, Armstrong, Zan, Jang, Junghoon, Kang, Hui, Pawlosky, Annalisa, Scott, Alexander, Dahl, George E., Berndl, Marc, Dimon, Michelle, Ferguson, B. Scott
Published in Nature communications (22.04.2021)
Published in Nature communications (22.04.2021)
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Journal Article
Artificial intelligence in digital pathology: a roadmap to routine use in clinical practice
Colling, Richard, Pitman, Helen, Oien, Karin, Rajpoot, Nasir, Macklin, Philip, Bachtiar, Velicia, Booth, Richard, Bryant, Alyson, Bull, Joshua, Bury, Jonathan, Carragher, Fiona, Colling, Richard, Collins, Graeme, Craig, Clare, da Silva, Maria Freitas, Gosling, Daniel, Jacobs, Jaco, Kajland‐Wilén, Lena, Karling, Johanna, Lawler, Darragh, Lee, Stephen, Macklin, Philip, Miller, Keith, Mozolowski, Guy, Nicholson, Richard, O'Connor, Daniel, Rahbek, Mikkel, Rajpoot, Nasir, Sumner, Alan, Vossen, Dirk, White, Kieron, Wing, Charlotte, Wright, Corrina, Snead, David, Sackville, Tony, Verrill, Clare
Published in The Journal of pathology (01.10.2019)
Published in The Journal of pathology (01.10.2019)
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Journal Article
Mechanistic study of ANXA3-mediated endoplasmic reticulum stress promoting M1 macrophage polarization in pulmonary arterial hypertension based on bioinformatics and nine machine learning algorithms
Xing, Chen, Limei, Liang, Liping, Xu, Lixiang, Li, Liulin, Yang, Guizi, Liang, Dongwei, Xie, Juan, Liao, Hui, Meng, Yan, Deng
Published in Computers in biology and medicine (01.11.2025)
Published in Computers in biology and medicine (01.11.2025)
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Journal Article
Hemodynamic Modeling, Medical Imaging, and Machine Learning and Their Applications to Cardiovascular Interventions
Kadem, Mason, Garber, Louis, Abdelkhalek, Mohamed, Al-Khazraji, Baraa K., Keshavarz-Motamed, Zahra
Published in IEEE reviews in biomedical engineering (2023)
Published in IEEE reviews in biomedical engineering (2023)
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Journal Article