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MUMmer4: A fast and versatile genome alignment system
Marçais, Guillaume, Delcher, Arthur L., Phillippy, Adam M., Coston, Rachel, Salzberg, Steven L., Zimin, Aleksey
Published in PLoS computational biology (01.01.2018)
Published in PLoS computational biology (01.01.2018)
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Journal Article
A Decomposition Method for Global Evaluation of Shannon Entropy and Local Estimations of Algorithmic Complexity
Zenil, Hector, Hernández-Orozco, Santiago, Kiani, Narsis A., Soler-Toscano, Fernando, Rueda-Toicen, Antonio, Tegnér, Jesper
Published in Entropy (Basel, Switzerland) (01.08.2018)
Published in Entropy (Basel, Switzerland) (01.08.2018)
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Journal Article
uShuffle: A useful tool for shuffling biological sequences while preserving the k-let counts
Jiang, Minghui, Anderson, James, Gillespie, Joel, Mayne, Martin
Published in BMC bioinformatics (11.04.2008)
Published in BMC bioinformatics (11.04.2008)
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Journal Article
ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data
Zagordi, Osvaldo, Bhattacharya, Arnab, Eriksson, Nicholas, Beerenwinkel, Niko
Published in BMC bioinformatics (26.04.2011)
Published in BMC bioinformatics (26.04.2011)
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Journal Article
GRIMM: GRaph IMputation and matching for HLA genotypes
Maiers, Martin, Halagan, Michael, Gragert, Loren, Bashyal, Pradeep, Brelsford, Jason, Schneider, Joel, Lutsker, Polina, Louzoun, Yoram
Published in Bioinformatics (15.09.2019)
Published in Bioinformatics (15.09.2019)
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Journal Article
FreeContact: fast and free software for protein contact prediction from residue co-evolution
Kaján, László, Hopf, Thomas A, Kalaš, Matúš, Marks, Debora S, Rost, Burkhard
Published in BMC bioinformatics (26.03.2014)
Published in BMC bioinformatics (26.03.2014)
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Journal Article
The Bioperl Toolkit: Perl Modules for the Life Sciences
Stajich, Jason E., Block, David, Boulez, Kris, Brenner, Steven E., Chervitz, Stephen A., Dagdigian, Chris, Fuellen, Georg, Gilbert, James G.R., Korf, Ian, Lapp, Hilmar, Lehväslaiho, Heikki, Matsalla, Chad, Mungall, Chris J., Osborne, Brian I., Pocock, Matthew R., Schattner, Peter, Senger, Martin, Stein, Lincoln D., Stupka, Elia, Wilkinson, Mark D., Birney, Ewan
Published in Genome research (01.10.2002)
Published in Genome research (01.10.2002)
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Journal Article
Accessing the SEED Genome Databases via Web Services API: Tools for Programmers
Disz, Terry, Akhter, Sajia, Cuevas, Daniel, Olson, Robert, Overbeek, Ross, Vonstein, Veronika, Stevens, Rick, Edwards, Robert A
Published in BMC bioinformatics (14.06.2010)
Published in BMC bioinformatics (14.06.2010)
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Journal Article
Detection of Salmonella Typhimurium contamination levels in fresh pork samples using electronic nose smellprints in tandem with support vector machine regression and metaheuristic optimization algorithms
Bonah, Ernest, Huang, Xingyi, Hongying, Yang, Aheto, Joshua Harrington, Yi, Ren, Yu, Shanshan, Tu, Hongyang
Published in Journal of food science and technology (01.10.2021)
Published in Journal of food science and technology (01.10.2021)
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Journal Article
Optimized AI-MPM: Application of PSO for tuning the hyperparameters of SVM and RF algorithms
Daviran, Mehrdad, Maghsoudi, Abbas, Ghezelbash, Reza
Published in Computers & geosciences (01.02.2025)
Published in Computers & geosciences (01.02.2025)
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Journal Article
Hybrid PSO-HSA and PSO-GA algorithm for 3D path planning in autonomous UAVs
Abhishek, B., Ranjit, S., Shankar, T., Eappen, Geoffrey, Sivasankar, P., Rajesh, A.
Published in SN applied sciences (01.11.2020)
Published in SN applied sciences (01.11.2020)
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Journal Article
Prediction of meteorological drought by using hybrid support vector regression optimized with HHO versus PSO algorithms
Malik, Anurag, Tikhamarine, Yazid, Sammen, Saad Shauket, Abba, Sani Isah, Shahid, Shamsuddin
Published in Environmental science and pollution research international (01.08.2021)
Published in Environmental science and pollution research international (01.08.2021)
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Journal Article