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    uShuffle: A useful tool for shuffling biological sequences while preserving the k-let counts
                                      
                                            Jiang, Minghui,                              Anderson, James,                              Gillespie, Joel,                              Mayne, Martin                              
Published in BMC bioinformatics (11.04.2008)
                   
      
      
                                                  Published in BMC bioinformatics (11.04.2008)
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          BAMQL: a query language for extracting reads from BAM files
                                      
                                            Masella, Andre P.,                              Lalansingh, Christopher M.,                              Sivasundaram, Pragash,                              Fraser, Michael,                              Bristow, Robert G.,                              Boutros, Paul C.                              
Published in BMC bioinformatics (11.08.2016)
                   
      
      
                                                  Published in BMC bioinformatics (11.08.2016)
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          MUMmer4: A fast and versatile genome alignment system
                                      
                                            Marçais, Guillaume,                              Delcher, Arthur L.,                              Phillippy, Adam M.,                              Coston, Rachel,                              Salzberg, Steven L.,                              Zimin, Aleksey                              
Published in PLoS computational biology (01.01.2018)
                   
      
      
                                                  Published in PLoS computational biology (01.01.2018)
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          A Decomposition Method for Global Evaluation of Shannon Entropy and Local Estimations of Algorithmic Complexity
                                      
                                            Zenil, Hector,                              Hernández-Orozco, Santiago,                              Kiani, Narsis A.,                              Soler-Toscano, Fernando,                              Rueda-Toicen, Antonio,                              Tegnér, Jesper                              
Published in Entropy (Basel, Switzerland) (01.08.2018)
                   
      
      
                                                  Published in Entropy (Basel, Switzerland) (01.08.2018)
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          GRIMM: GRaph IMputation and matching for HLA genotypes
                                      
                                            Maiers, Martin,                              Halagan, Michael,                              Gragert, Loren,                              Bashyal, Pradeep,                              Brelsford, Jason,                              Schneider, Joel,                              Lutsker, Polina,                              Louzoun, Yoram                              
Published in Bioinformatics (15.09.2019)
                   
      
      
                                                  Published in Bioinformatics (15.09.2019)
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          LibSBML: an API Library for SBML
                                      
                                            Bornstein, Benjamin J.,                              Keating, Sarah M.,                              Jouraku, Akiya,                              Hucka, Michael                              
Published in Bioinformatics (15.03.2008)
                   
      
      
                                                  Published in Bioinformatics (15.03.2008)
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          The Bioperl Toolkit: Perl Modules for the Life Sciences
                                      
                                            Stajich, Jason E.,                              Block, David,                              Boulez, Kris,                              Brenner, Steven E.,                              Chervitz, Stephen A.,                              Dagdigian, Chris,                              Fuellen, Georg,                              Gilbert, James G.R.,                              Korf, Ian,                              Lapp, Hilmar,                              Lehväslaiho, Heikki,                              Matsalla, Chad,                              Mungall, Chris J.,                              Osborne, Brian I.,                              Pocock, Matthew R.,                              Schattner, Peter,                              Senger, Martin,                              Stein, Lincoln D.,                              Stupka, Elia,                              Wilkinson, Mark D.,                              Birney, Ewan                              
Published in Genome research (01.10.2002)
                   
      
      
                                                  Published in Genome research (01.10.2002)
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          ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data
                                      
                                            Zagordi, Osvaldo,                              Bhattacharya, Arnab,                              Eriksson, Nicholas,                              Beerenwinkel, Niko                              
Published in BMC bioinformatics (26.04.2011)
                   
      
      
                                                  Published in BMC bioinformatics (26.04.2011)
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          Development of phenotype algorithms using electronic medical records and incorporating natural language processing
                                      
                                            Liao, Katherine P,                              Cai, Tianxi,                              Savova, Guergana K,                              Murphy, Shawn N,                              Karlson, Elizabeth W,                              Ananthakrishnan, Ashwin N,                              Gainer, Vivian S,                              Shaw, Stanley Y,                              Xia, Zongqi,                              Szolovits, Peter,                              Churchill, Susanne,                              Kohane, Isaac                              
Published in BMJ (Online) (24.04.2015)
                   
      
      
                                                  Published in BMJ (Online) (24.04.2015)
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          Developing and validating natural language processing algorithms for radiology reports compared to ICD-10 codes for identifying venous thromboembolism in hospitalized medical patients
                                      
                                            Verma, Amol A.,                              Masoom, Hassan,                              Pou-Prom, Chloe,                              Shin, Saeha,                              Guerzhoy, Michael,                              Fralick, Michael,                              Mamdani, Muhammad,                              Razak, Fahad                              
Published in Thrombosis research (01.01.2022)
                   
      
      
                                                  Published in Thrombosis research (01.01.2022)
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