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    Gene selection for cancer identification: a decision tree model empowered by particle swarm optimization algorithm
                                      
                                            Chen, Kun-Huang,                              Wang, Kung-Jeng,                              Tsai, Min-Lung,                              Wang, Kung-Min,                              Adrian, Angelia Melani,                              Cheng, Wei-Chung,                              Yang, Tzu-Sen,                              Teng, Nai-Chia,                              Tan, Kuo-Pin,                              Chang, Ku-Shang                              
Published in BMC bioinformatics (20.02.2014)
                   
      
      
                                                  Published in BMC bioinformatics (20.02.2014)
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          A Decomposition Method for Global Evaluation of Shannon Entropy and Local Estimations of Algorithmic Complexity
                                      
                                            Zenil, Hector,                              Hernández-Orozco, Santiago,                              Kiani, Narsis A.,                              Soler-Toscano, Fernando,                              Rueda-Toicen, Antonio,                              Tegnér, Jesper                              
Published in Entropy (Basel, Switzerland) (01.08.2018)
                   
      
      
                                                  Published in Entropy (Basel, Switzerland) (01.08.2018)
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          A business process clustering algorithm using incremental covering arrays to explore search space and balanced Bayesian information criterion to evaluate quality of solutions
                                      
                                            Ordoñez, Hugo,                              Torres-Jimenez, Jose,                              Cobos, Carlos,                              Ordoñez, Armando,                              Herrera-Viedma, Enrique,                              Maldonado-Martinez, Gildardo                              
Published in PloS one (13.06.2019)
                   
      
      
                                                  Published in PloS one (13.06.2019)
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          Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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          A multi-aspect comparison study of supervised word sense disambiguation
                                      
                                            Liu, Hongfang,                              Teller, Virginia,                              Friedman, Carol                              
Published in Journal of the American Medical Informatics Association : JAMIA (01.07.2004)
                   
      
      
                                                  Published in Journal of the American Medical Informatics Association : JAMIA (01.07.2004)
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          Integrating biological knowledge into variable selection: an empirical Bayes approach with an application in cancer biology
                                      
                                            Hill, Steven M,                              Neve, Richard M,                              Bayani, Nora,                              Kuo, Wen-Lin,                              Ziyad, Safiyyah,                              Spellman, Paul T,                              Gray, Joe W,                              Mukherjee, Sach                              
Published in BMC bioinformatics (11.05.2012)
                   
      
      
                                                  Published in BMC bioinformatics (11.05.2012)
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          uShuffle: A useful tool for shuffling biological sequences while preserving the k-let counts
                                      
                                            Jiang, Minghui,                              Anderson, James,                              Gillespie, Joel,                              Mayne, Martin                              
Published in BMC bioinformatics (11.04.2008)
                   
      
      
                                                  Published in BMC bioinformatics (11.04.2008)
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          Comparative phylogenomics of the food-borne pathogen Campylobacter jejuni reveals genetic markers predictive of infection source
                                      
                                            Champion, O.L,                              Gaunt, M.W,                              Gundogdu, O,                              Elmi, A,                              Witney, A.A,                              Hinds, J,                              Dorrell, N,                              Wren, B.W                              
Published in Proceedings of the National Academy of Sciences - PNAS (01.11.2005)
                   
      
      
                                                  Published in Proceedings of the National Academy of Sciences - PNAS (01.11.2005)
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          Genetic Structure, Linkage Disequilibrium and Signature of Selection in Sorghum: Lessons from Physically Anchored DArT Markers
                                      
                                            Bouchet, Sophie,                              Pot, David,                              Deu, Monique,                              Rami, Jean-François,                              Billot, Claire,                              Perrier, Xavier,                              Rivallan, Ronan,                              Gardes, Laëtitia,                              Xia, Ling,                              Wenzl, Peter,                              Kilian, Andrzej,                              Glaszmann, Jean-Christophe                              
Published in PloS one (13.03.2012)
                   
      
      
                                                  Published in PloS one (13.03.2012)
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          Integrated Genetic and Epigenetic Analysis Identifies Haplotype-Specific Methylation in the FTO Type 2 Diabetes and Obesity Susceptibility Locus
                                      
                                            Bell, Christopher G.,                              Finer, Sarah,                              Lindgren, Cecilia M.,                              Wilson, Gareth A.,                              Rakyan, Vardhman K.,                              Teschendorff, Andrew E.,                              Akan, Pelin,                              Stupka, Elia,                              Down, Thomas A.,                              Prokopenko, Inga,                              Morison, Ian M.,                              Mill, Jonathan,                              Pidsley, Ruth,                              Deloukas, Panos,                              Frayling, Timothy M.,                              Hattersley, Andrew T.,                              McCarthy, Mark I.,                              Beck, Stephan,                              Hitman, Graham A.                              
Published in PloS one (18.11.2010)
                   
      
      
                                                  Published in PloS one (18.11.2010)
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          A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis
                                      
                                            Down, Thomas A,                              Rakyan, Vardhman K,                              Turner, Daniel J,                              Flicek, Paul,                              Li, Heng,                              Kulesha, Eugene,                              Gräf, Stefan,                              Johnson, Nathan,                              Herrero, Javier,                              Tomazou, Eleni M,                              Thorne, Natalie P,                              Bäckdahl, Liselotte,                              Herberth, Marlis,                              Howe, Kevin L,                              Jackson, David K,                              Miretti, Marcos M,                              Marioni, John C,                              Birney, Ewan,                              Hubbard, Tim J P,                              Durbin, Richard,                              Tavaré, Simon,                              Beck, Stephan                              
Published in Nature biotechnology (01.07.2008)
                   
      
      
                                                  Published in Nature biotechnology (01.07.2008)
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