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    uShuffle: A useful tool for shuffling biological sequences while preserving the k-let counts
                                      
                                            Jiang, Minghui,                              Anderson, James,                              Gillespie, Joel,                              Mayne, Martin                              
Published in BMC bioinformatics (11.04.2008)
                   
      
      
                                                  Published in BMC bioinformatics (11.04.2008)
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          GRIMM: GRaph IMputation and matching for HLA genotypes
                                      
                                            Maiers, Martin,                              Halagan, Michael,                              Gragert, Loren,                              Bashyal, Pradeep,                              Brelsford, Jason,                              Schneider, Joel,                              Lutsker, Polina,                              Louzoun, Yoram                              
Published in Bioinformatics (15.09.2019)
                   
      
      
                                                  Published in Bioinformatics (15.09.2019)
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          The Bioperl Toolkit: Perl Modules for the Life Sciences
                                      
                                            Stajich, Jason E.,                              Block, David,                              Boulez, Kris,                              Brenner, Steven E.,                              Chervitz, Stephen A.,                              Dagdigian, Chris,                              Fuellen, Georg,                              Gilbert, James G.R.,                              Korf, Ian,                              Lapp, Hilmar,                              Lehväslaiho, Heikki,                              Matsalla, Chad,                              Mungall, Chris J.,                              Osborne, Brian I.,                              Pocock, Matthew R.,                              Schattner, Peter,                              Senger, Martin,                              Stein, Lincoln D.,                              Stupka, Elia,                              Wilkinson, Mark D.,                              Birney, Ewan                              
Published in Genome research (01.10.2002)
                   
      
      
                                                  Published in Genome research (01.10.2002)
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          MUMmer4: A fast and versatile genome alignment system
                                      
                                            Marçais, Guillaume,                              Delcher, Arthur L.,                              Phillippy, Adam M.,                              Coston, Rachel,                              Salzberg, Steven L.,                              Zimin, Aleksey                              
Published in PLoS computational biology (01.01.2018)
                   
      
      
                                                  Published in PLoS computational biology (01.01.2018)
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          A Decomposition Method for Global Evaluation of Shannon Entropy and Local Estimations of Algorithmic Complexity
                                      
                                            Zenil, Hector,                              Hernández-Orozco, Santiago,                              Kiani, Narsis A.,                              Soler-Toscano, Fernando,                              Rueda-Toicen, Antonio,                              Tegnér, Jesper                              
Published in Entropy (Basel, Switzerland) (01.08.2018)
                   
      
      
                                                  Published in Entropy (Basel, Switzerland) (01.08.2018)
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          pyFIT3D and pyPipe3D -- The new version of the Integral Field Spectroscopy data analysis pipeline
                                      
                                            Lacerda, Eduardo A D,                              Sánchez, S F,                              Mejía-Narváez, A,                              Camps-Fariña, A,                              Espinosa-Ponce, C,                              Barrera-Ballesteros, J K,                              Ibarra-Medel, H,                              Lugo-Aranda, A Z                              
Published in arXiv.org (26.07.2022)
                   
      
      
                                                  Published in arXiv.org (26.07.2022)
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          Guiding Principles to Address the Impact of Algorithm Bias on Racial and Ethnic Disparities in Health and Health Care
                                      
                                            Chin, Marshall H.,                              Afsar-Manesh, Nasim,                              Bierman, Arlene S.,                              Chang, Christine,                              Colón-Rodríguez, Caleb J.,                              Dullabh, Prashila,                              Duran, Deborah Guadalupe,                              Fair, Malika,                              Hernandez-Boussard, Tina,                              Hightower, Maia,                              Jain, Anjali,                              Jordan, William B.,                              Konya, Stephen,                              Moore, Roslyn Holliday,                              Moore, Tamra Tyree,                              Rodriguez, Richard,                              Shaheen, Gauher,                              Snyder, Lynne Page,                              Srinivasan, Mithuna,                              Umscheid, Craig A.,                              Ohno-Machado, Lucila                              
Published in JAMA network open (01.12.2023)
                   
      
      
                                                  Published in JAMA network open (01.12.2023)
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          BAMQL: a query language for extracting reads from BAM files
                                      
                                            Masella, Andre P.,                              Lalansingh, Christopher M.,                              Sivasundaram, Pragash,                              Fraser, Michael,                              Bristow, Robert G.,                              Boutros, Paul C.                              
Published in BMC bioinformatics (11.08.2016)
                   
      
      
                                                  Published in BMC bioinformatics (11.08.2016)
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          A systematic bias in template-based radial velocity extraction algorithms
                                      
                                            Silva, A. M.,                              Santos, N. C.,                              Faria, J. P.,                              Martins, J. H. C.,                              Cristo, E. A. S.,                              Sousa, S. G.,                              Viana, P. T. P.,                              Artigau, É.,                              Al Moulla, K.,                              Castro-González, A.,                              Folha, D. F. M.,                              Figueira, P.,                              Schmidt, T.,                              Pepe, F.,                              Dumusque, X.,                              Demangeon, O. D. S.,                              Campante, T. L.,                              Delfosse, X.,                              Wehbe, B.,                              Lillo-Box, J.,                              Costa Silva, A. R.,                              Rodrigues, J.,                              González Hernández, J. I.,                              Azevedo Silva, T.,                              Cristiani, S.,                              Tabernero, H. M.,                              Palle, E.,                              Lavie, B.,                              Suárez Mascareño, A.,                              Di Marcantonio, P.,                              Cabral, A.,                              Martins, C. J. A. P.,                              Nunes, N. J.,                              Sozzetti, A.                              
Published in Astronomy and astrophysics (Berlin) (01.08.2025)
                   
      
      
                                                  Published in Astronomy and astrophysics (Berlin) (01.08.2025)
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          Risk of bias in studies on prediction models developed using supervised machine learning techniques: systematic review
                                      
                                            Andaur Navarro, Constanza L,                              Damen, Johanna A A,                              Takada, Toshihiko,                              Nijman, Steven W J,                              Dhiman, Paula,                              Ma, Jie,                              Collins, Gary S,                              Bajpai, Ram,                              Riley, Richard D,                              Moons, Karel G M,                              Hooft, Lotty                              
Published in BMJ (Online) (20.10.2021)
                   
      
      
                                                  Published in BMJ (Online) (20.10.2021)
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          Mitigating bias in machine learning for medicine
                                      
                                            Vokinger, Kerstin N.,                              Feuerriegel, Stefan,                              Kesselheim, Aaron S.                              
Published in Communications medicine (23.08.2021)
                   
      
      
                                                  Published in Communications medicine (23.08.2021)
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