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MUMmer4: A fast and versatile genome alignment system
Marçais, Guillaume, Delcher, Arthur L., Phillippy, Adam M., Coston, Rachel, Salzberg, Steven L., Zimin, Aleksey
Published in PLoS computational biology (01.01.2018)
Published in PLoS computational biology (01.01.2018)
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Journal Article
Machine learning overcomes human bias in the discovery of self-assembling peptides
Batra, Rohit, Loeffler, Troy D., Chan, Henry, Srinivasan, Srilok, Cui, Honggang, Korendovych, Ivan V., Nanda, Vikas, Palmer, Liam C., Solomon, Lee A., Fry, H. Christopher, Sankaranarayanan, Subramanian K. R. S.
Published in Nature chemistry (01.12.2022)
Published in Nature chemistry (01.12.2022)
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Journal Article
uShuffle: A useful tool for shuffling biological sequences while preserving the k-let counts
Jiang, Minghui, Anderson, James, Gillespie, Joel, Mayne, Martin
Published in BMC bioinformatics (11.04.2008)
Published in BMC bioinformatics (11.04.2008)
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Journal Article
ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data
Zagordi, Osvaldo, Bhattacharya, Arnab, Eriksson, Nicholas, Beerenwinkel, Niko
Published in BMC bioinformatics (26.04.2011)
Published in BMC bioinformatics (26.04.2011)
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Journal Article
Integration of microarray data and literature mining identifies a sex bias in DPP4+CD4+ T cells in HIV-1 infection
Stubbe, Hans Christian, Dahlke, Christine, Rotheneder, Katharina, Stirner, Renate, Roider, Julia, Conca, Raffaele, Seybold, Ulrich, Bogner, Johannes, Addo, Marylyn Martina, Draenert, Rika
Published in PloS one (18.09.2020)
Published in PloS one (18.09.2020)
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Journal Article
Discovery of novel variants in genotyping arrays improves genotype retention and reduces ascertainment bias
Didion, John P, Yang, Hyuna, Sheppard, Keith, Fu, Chen-Ping, McMillan, Leonard, de Villena, Fernando Pardo-Manuel, Churchill, Gary A
Published in BMC genomics (19.01.2012)
Published in BMC genomics (19.01.2012)
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Journal Article
FreeContact: fast and free software for protein contact prediction from residue co-evolution
Kaján, László, Hopf, Thomas A, Kalaš, Matúš, Marks, Debora S, Rost, Burkhard
Published in BMC bioinformatics (26.03.2014)
Published in BMC bioinformatics (26.03.2014)
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Journal Article
GRIMM: GRaph IMputation and matching for HLA genotypes
Maiers, Martin, Halagan, Michael, Gragert, Loren, Bashyal, Pradeep, Brelsford, Jason, Schneider, Joel, Lutsker, Polina, Louzoun, Yoram
Published in Bioinformatics (15.09.2019)
Published in Bioinformatics (15.09.2019)
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Journal Article
Characterizing dye bias in microarray experiments
Dobbin, K. K., Kawasaki, E. S., Petersen, D. W., Simon, R. M.
Published in Bioinformatics (15.05.2005)
Published in Bioinformatics (15.05.2005)
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Journal Article
Sb 2 S 3 -Based Dynamically Tuned Color Filter Array via Genetic Algorithm
Wei, Xueling, Nong, Jie, Zhang, Yiyi, Ma, Hansi, Huang, Rixing, Yuan, Zhenkun, Zhang, Zhenfu, Zhang, Zhenrong, Yang, Junbo
Published in Nanomaterials (Basel, Switzerland) (24.04.2023)
Published in Nanomaterials (Basel, Switzerland) (24.04.2023)
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Journal Article
The Bioperl Toolkit: Perl Modules for the Life Sciences
Stajich, Jason E., Block, David, Boulez, Kris, Brenner, Steven E., Chervitz, Stephen A., Dagdigian, Chris, Fuellen, Georg, Gilbert, James G.R., Korf, Ian, Lapp, Hilmar, Lehväslaiho, Heikki, Matsalla, Chad, Mungall, Chris J., Osborne, Brian I., Pocock, Matthew R., Schattner, Peter, Senger, Martin, Stein, Lincoln D., Stupka, Elia, Wilkinson, Mark D., Birney, Ewan
Published in Genome research (01.10.2002)
Published in Genome research (01.10.2002)
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Journal Article
Evaluation of Microarray Preprocessing Algorithms Based on Concordance with RT-PCR in Clinical Samples
Gyorffy, Balazs, Molnar, Bela, Lage, Hermann, Szallasi, Zoltan, Eklund, Aron C.
Published in PloS one (21.05.2009)
Published in PloS one (21.05.2009)
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Journal Article
Sb[sub.2]S[sub.3]-Based Dynamically Tuned Color Filter Array via Genetic Algorithm
Wei, Xueling, Nong, Jie, Zhang, Yiyi, Ma, Hansi, Huang, Rixing, Yuan, Zhenkun, Zhang, Zhenfu, Zhang, Zhenrong, Yang, Junbo
Published in Nanomaterials (Basel, Switzerland) (01.04.2023)
Published in Nanomaterials (Basel, Switzerland) (01.04.2023)
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Journal Article
xDEEP-MSI: Explainable Bias-Rejecting Microsatellite Instability Deep Learning System in Colorectal Cancer
Bustos, Aurelia, Payá, Artemio, Torrubia, Andrés, Jover, Rodrigo, Llor, Xavier, Bessa, Xavier, Castells, Antoni, Carracedo, Ángel, Alenda, Cristina
Published in Biomolecules (Basel, Switzerland) (29.11.2021)
Published in Biomolecules (Basel, Switzerland) (29.11.2021)
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Journal Article