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    Core Imaging Library - Part I: a versatile Python framework for tomographic imaging
                                      
                                            Jørgensen, J. S.,                              Ametova, E.,                              Burca, G.,                              Fardell, G.,                              Papoutsellis, E.,                              Pasca, E.,                              Thielemans, K.,                              Turner, M.,                              Warr, R.,                              Lionheart, W. R. B.,                              Withers, P. J.                              
Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (23.08.2021)
                   
      
      
                                                  Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (23.08.2021)
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          Efficiently accelerated bioimage analysis with NanoPyx, a Liquid Engine-powered Python framework
                                      
                                            Saraiva, Bruno M.,                              Cunha, Inês,                              Brito, António D.,                              Follain, Gautier,                              Portela, Raquel,                              Haase, Robert,                              Pereira, Pedro M.,                              Jacquemet, Guillaume,                              Henriques, Ricardo                              
Published in Nature methods (01.02.2025)
                   
      
      
                                                  Published in Nature methods (01.02.2025)
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          Fast, computer‐assisted detection of dust and debris impact craters on Stardust interstellar foils
                                      
                                            De Gregorio, Bradley T.,                              Opsahl‐Ong, Jessica,                              Chizmadia, Lysa,                              Brintlinger, Todd H.,                              Westphal, Andrew J.,                              Stroud, Rhonda M.,                              Brownlee, Donald                              
Published in Meteoritics & planetary science (01.05.2021)
                   
      
      
                                                  Published in Meteoritics & planetary science (01.05.2021)
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          Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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          MXene/WO 3 Sensor Array with Improved SNN Algorithm for Accurate Identification of Toxic Gases
                                      
                                            Guo, Liangchao,                              Wang, Junke,                              Han, Haoran,                              Wang, Peng,                              Lu, Yunxiang,                              Yuan, Qilong,                              Du, Chunyu,                              Yin, Shuo,                              Zhou, Ye,                              Zhang, Chao                              
Published in ACS applied materials & interfaces (13.11.2024)
                   
      
      
                                                  Published in ACS applied materials & interfaces (13.11.2024)
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          PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
                                      
                                            Singh, Gursimran,                              Chharia, Aviral,                              Upadhyay, Rahul,                              Kumar, Vinay,                              Longo, Luca                              
Published in PloS one (06.08.2025)
                   
      
      
                                                  Published in PloS one (06.08.2025)
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          Image processing for electron microscopy single-particle analysis using XMIPP
                                      
                                            Scheres, Sjors H W,                              Núñez-Ramírez, Rafael,                              Sorzano, Carlos O S,                              Carazo, José María,                              Marabini, Roberto                              
Published in Nature protocols (01.06.2008)
                   
      
      
                                                  Published in Nature protocols (01.06.2008)
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          Bioinformatic pipelines in Python with Leaf
                                      
                                            Napolitano, Francesco,                              Mariani-Costantini, Renato,                              Tagliaferri, Roberto                              
Published in BMC bioinformatics (21.06.2013)
                   
      
      
                                                  Published in BMC bioinformatics (21.06.2013)
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          PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
                                      
                                            Georgi, Benjamin,                              Costa, Ivan Gesteira,                              Schliep, Alexander                              
Published in BMC bioinformatics (06.01.2010)
                   
      
      
                                                  Published in BMC bioinformatics (06.01.2010)
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          RExPrimer: an integrated primer designing tool increases PCR effectiveness by avoiding 3' SNP-in-primer and mis-priming from structural variation
                                      
                                            Piriyapongsa, Jittima,                              Ngamphiw, Chumpol,                              Assawamakin, Anunchai,                              Wangkumhang, Pongsakorn,                              Suwannasri, Payiarat,                              Ruangrit, Uttapong,                              Agavatpanitch, Gallissara,                              Tongsima, Sissades                              
Published in BMC genomics (03.12.2009)
                   
      
      
                                                  Published in BMC genomics (03.12.2009)
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          easyspec: An Open-source Python Package for Long-slit Spectroscopy
                                      
                                            de Menezes, Raniere,                              Massaro, Francesco,                              Negro, Michela,                              Raiteri, Claudia M.,                              Peña-Herazo, Harold,                              Acosta-Pulido, Jose A.                              
Published in The Astronomical journal (01.09.2025)
                   
      
      
                                                  Published in The Astronomical journal (01.09.2025)
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