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pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment
Warris, Sven, Timal, N. Roshan N., Kempenaar, Marcel, Poortinga, Arne M., van de Geest, Henri, Varbanescu, Ana L., Nap, Jan-Peter
Published in PloS one (02.01.2018)
Published in PloS one (02.01.2018)
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Journal Article
Legate Sparse: Distributed Sparse Computing in Python
Yadav, Rohan, Lee, Wonchan, Elibol, Melih, Patti, Taylor Lee, Papadakis, Manolis, Garland, Michael, Aiken, Alex, Kjolstad, Fredrik, Bauer, Michael
Published in International Conference for High Performance Computing, Networking, Storage and Analysis (Online) (11.11.2023)
Published in International Conference for High Performance Computing, Networking, Storage and Analysis (Online) (11.11.2023)
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Conference Proceeding
ITEP: An integrated toolkit for exploration of microbial pan-genomes
Benedict, Matthew N, Henriksen, James R, Metcalf, William W, Whitaker, Rachel J, Price, Nathan D
Published in BMC genomics (03.01.2014)
Published in BMC genomics (03.01.2014)
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Journal Article
Fast, computer‐assisted detection of dust and debris impact craters on Stardust interstellar foils
De Gregorio, Bradley T., Opsahl‐Ong, Jessica, Chizmadia, Lysa, Brintlinger, Todd H., Westphal, Andrew J., Stroud, Rhonda M., Brownlee, Donald
Published in Meteoritics & planetary science (01.05.2021)
Published in Meteoritics & planetary science (01.05.2021)
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Journal Article
LASSIM—A network inference toolbox for genome-wide mechanistic modeling
Magnusson, Rasmus, Mariotti, Guido Pio, Köpsén, Mattias, Lövfors, William, Gawel, Danuta R., Jörnsten, Rebecka, Linde, Jörg, Nordling, Torbjörn E. M., Nyman, Elin, Schulze, Sylvie, Nestor, Colm E., Zhang, Huan, Cedersund, Gunnar, Benson, Mikael, Tjärnberg, Andreas, Gustafsson, Mika
Published in PLoS computational biology (01.06.2017)
Published in PLoS computational biology (01.06.2017)
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Journal Article