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PyBEST: Improved functionality and enhanced performance
Boguslawski, Katharina, Brzęk, Filip, Chakraborty, Rahul, Cieślak, Kacper, Jahani, Seyedehdelaram, Leszczyk, Aleksandra, Nowak, Artur, Sujkowski, Emil, Świerczyński, Julian, Ahmadkhani, Somayeh, Kędziera, Dariusz, Kriebel, Maximilian H., Żuchowski, Piotr Szymon, Tecmer, Paweł
Published in Computer physics communications (01.04.2024)
Published in Computer physics communications (01.04.2024)
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Journal Article
Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
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Journal Article
MetPy: A Meteorological Python Library for Data Analysis and Visualization
May, Ryan M., Goebbert, Kevin H., Thielen, Jonathan E., Leeman, John R., Camron, M. Drew, Bruick, Zachary, Bruning, Eric C., Manser, Russell P., Arms, Sean C., Marsh, Patrick T.
Published in Bulletin of the American Meteorological Society (01.10.2022)
Published in Bulletin of the American Meteorological Society (01.10.2022)
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Journal Article
A framework to create customised LHC analyses within CheckMATE
Kim, Jong Soo, Schmeier, Daniel, Tattersall, Jamie, Rolbiecki, Krzysztof
Published in Computer physics communications (01.11.2015)
Published in Computer physics communications (01.11.2015)
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Journal Article
pyUPMASK: an improved unsupervised clustering algorithm
Pera, M. S., Perren, G. I., Moitinho, A., Navone, H. D., Vazquez, R. A.
Published in Astronomy and astrophysics (Berlin) (01.06.2021)
Published in Astronomy and astrophysics (Berlin) (01.06.2021)
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Journal Article
Fractal dimension of coastline of Australia
Husain, Akhlaq, Reddy, Jaideep, Bisht, Deepika, Sajid, Mohammad
Published in Scientific reports (18.03.2021)
Published in Scientific reports (18.03.2021)
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Journal Article
pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment
Warris, Sven, Timal, N. Roshan N., Kempenaar, Marcel, Poortinga, Arne M., van de Geest, Henri, Varbanescu, Ana L., Nap, Jan-Peter
Published in PloS one (02.01.2018)
Published in PloS one (02.01.2018)
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Journal Article
RAMBO-K: Rapid and Sensitive Removal of Background Sequences from Next Generation Sequencing Data
Tausch, Simon H., Renard, Bernhard Y., Nitsche, Andreas, Dabrowski, Piotr Wojciech
Published in PloS one (17.09.2015)
Published in PloS one (17.09.2015)
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Journal Article
mzapy: An Open-Source Python Library Enabling Efficient Extraction and Processing of Ion Mobility Spectrometry-Mass Spectrometry Data in the MZA File Format
Ross, Dylan, Bilbao, Aivett, Lee, Joon-Yong, Zheng, Xueyun
Published in Analytical chemistry (Washington) (27.06.2023)
Published in Analytical chemistry (Washington) (27.06.2023)
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Journal Article
Toward a unified framework for interpreting machine-learning models in neuroimaging
Kohoutová, Lada, Heo, Juyeon, Cha, Sungmin, Lee, Sungwoo, Moon, Taesup, Wager, Tor D., Woo, Choong-Wan
Published in Nature protocols (01.04.2020)
Published in Nature protocols (01.04.2020)
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Journal Article
Landscape of High-Performance Python to Develop Data Science and Machine Learning Applications
Castro, Oscar, Bruneau, Pierrick, Sottet, Jean-Sébastien, Torregrossa, Dario
Published in ACM computing surveys (31.03.2024)
Published in ACM computing surveys (31.03.2024)
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Journal Article