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MetPy: A Meteorological Python Library for Data Analysis and Visualization
May, Ryan M., Goebbert, Kevin H., Thielen, Jonathan E., Leeman, John R., Camron, M. Drew, Bruick, Zachary, Bruning, Eric C., Manser, Russell P., Arms, Sean C., Marsh, Patrick T.
Published in Bulletin of the American Meteorological Society (01.10.2022)
Published in Bulletin of the American Meteorological Society (01.10.2022)
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Journal Article
pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment
Warris, Sven, Timal, N. Roshan N., Kempenaar, Marcel, Poortinga, Arne M., van de Geest, Henri, Varbanescu, Ana L., Nap, Jan-Peter
Published in PloS one (02.01.2018)
Published in PloS one (02.01.2018)
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Journal Article
Introducing GPU Acceleration into the Python-Based Simulations of Chemistry Framework
Li, Rui, Sun, Qiming, Zhang, Xing, Chan, Garnet Kin-Lic
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (06.02.2025)
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (06.02.2025)
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Journal Article
Efficiently accelerated bioimage analysis with NanoPyx, a Liquid Engine-powered Python framework
Saraiva, Bruno M., Cunha, Inês, Brito, António D., Follain, Gautier, Portela, Raquel, Haase, Robert, Pereira, Pedro M., Jacquemet, Guillaume, Henriques, Ricardo
Published in Nature methods (01.02.2025)
Published in Nature methods (01.02.2025)
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Journal Article
Optimal Fitting and Debiasing for Detectors Read Out Up-the-Ramp
Brandt, Timothy D.
Published in Publications of the Astronomical Society of the Pacific (01.04.2024)
Published in Publications of the Astronomical Society of the Pacific (01.04.2024)
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Journal Article
An Introduction to Programming for Bioscientists: A Python-Based Primer
Ekmekci, Berk, McAnany, Charles E., Mura, Cameron
Published in PLoS computational biology (01.06.2016)
Published in PLoS computational biology (01.06.2016)
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Journal Article
Fast, computer‐assisted detection of dust and debris impact craters on Stardust interstellar foils
De Gregorio, Bradley T., Opsahl‐Ong, Jessica, Chizmadia, Lysa, Brintlinger, Todd H., Westphal, Andrew J., Stroud, Rhonda M., Brownlee, Donald
Published in Meteoritics & planetary science (01.05.2021)
Published in Meteoritics & planetary science (01.05.2021)
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Journal Article
LASSIM—A network inference toolbox for genome-wide mechanistic modeling
Magnusson, Rasmus, Mariotti, Guido Pio, Köpsén, Mattias, Lövfors, William, Gawel, Danuta R., Jörnsten, Rebecka, Linde, Jörg, Nordling, Torbjörn E. M., Nyman, Elin, Schulze, Sylvie, Nestor, Colm E., Zhang, Huan, Cedersund, Gunnar, Benson, Mikael, Tjärnberg, Andreas, Gustafsson, Mika
Published in PLoS computational biology (01.06.2017)
Published in PLoS computational biology (01.06.2017)
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Journal Article
Non-circular signals for nested array: sum–difference co-array and direction of arrival estimation algorithm
Yunfei, Wang, Jinqing, Shen, Xiaofei, Zhang, Yi, He, Xiangrui, Dai
Published in IET radar, sonar & navigation (01.01.2020)
Published in IET radar, sonar & navigation (01.01.2020)
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Journal Article
ViSAPy: A Python tool for biophysics-based generation of virtual spiking activity for evaluation of spike-sorting algorithms
Hagen, Espen, Ness, Torbjørn V., Khosrowshahi, Amir, Sørensen, Christina, Fyhn, Marianne, Hafting, Torkel, Franke, Felix, Einevoll, Gaute T.
Published in Journal of neuroscience methods (30.04.2015)
Published in Journal of neuroscience methods (30.04.2015)
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Journal Article
PyBEST: Improved functionality and enhanced performance
Boguslawski, Katharina, Brzęk, Filip, Chakraborty, Rahul, Cieślak, Kacper, Jahani, Seyedehdelaram, Leszczyk, Aleksandra, Nowak, Artur, Sujkowski, Emil, Świerczyński, Julian, Ahmadkhani, Somayeh, Kędziera, Dariusz, Kriebel, Maximilian H., Żuchowski, Piotr Szymon, Tecmer, Paweł
Published in Computer physics communications (01.04.2024)
Published in Computer physics communications (01.04.2024)
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Journal Article
Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
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Journal Article