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COBRApy: COnstraints-Based Reconstruction and Analysis for Python
Ebrahim, Ali, Lerman, Joshua A, Palsson, Bernhard O, Hyduke, Daniel R
Published in BMC systems biology (08.08.2013)
Published in BMC systems biology (08.08.2013)
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Journal Article
ArcOLITIRS: A Toolbox for Radiometric Calibration and Surface Temperature Estimation from Landsat 8 Products in ArcGIS Environment
Arunachalam, M., Joshua, R. Melwyn, Kochuparampil, Ajith Joseph, Saravanavel, J.
Published in Journal of the Indian Society of Remote Sensing (01.03.2023)
Published in Journal of the Indian Society of Remote Sensing (01.03.2023)
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Journal Article
K2 variable catalogue – II. Machine learning classification of variable stars and eclipsing binaries in K2 fields 0–4
Armstrong, D. J., Kirk, J., Lam, K. W. F., McCormac, J., Osborn, H. P., Spake, J., Walker, S., Brown, D. J. A., Kristiansen, M. H., Pollacco, D., West, R., Wheatley, P. J.
Published in Monthly notices of the Royal Astronomical Society (21.02.2016)
Published in Monthly notices of the Royal Astronomical Society (21.02.2016)
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Journal Article
SciPy 1.0: fundamental algorithms for scientific computing in Python
Virtanen, Pauli, Gommers, Ralf, Oliphant, Travis E., Haberland, Matt, Reddy, Tyler, Cournapeau, David, Burovski, Evgeni, Peterson, Pearu, Weckesser, Warren, Bright, Jonathan, van der Walt, Stéfan J., Brett, Matthew, Wilson, Joshua, Millman, K. Jarrod, Mayorov, Nikolay, Nelson, Andrew R. J., Jones, Eric, Kern, Robert, Larson, Eric, Carey, C J, Polat, İlhan, Feng, Yu, Moore, Eric W., VanderPlas, Jake, Laxalde, Denis, Perktold, Josef, Cimrman, Robert, Henriksen, Ian, Quintero, E. A., Harris, Charles R., Archibald, Anne M., Ribeiro, Antônio H., Pedregosa, Fabian, van Mulbregt, Paul
Published in Nature methods (01.03.2020)
Published in Nature methods (01.03.2020)
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Journal Article
Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors
Peng, Yun, Gao, Shuzheng, Gao, Cuiyun, Huo, Yintong, Lyu, Michael R.
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
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Conference Proceeding
GSEApy: a comprehensive package for performing gene set enrichment analysis in Python
Fang, Zhuoqing, Liu, Xinyuan, Peltz, Gary
Published in Bioinformatics (Oxford, England) (01.01.2023)
Published in Bioinformatics (Oxford, England) (01.01.2023)
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Journal Article
PyLog: An Algorithm-Centric Python-Based FPGA Programming and Synthesis Flow
Huang, Sitao, Wu, Kun, Jeong, Hyunmin, Wang, Chengyue, Chen, Deming, Hwu, Wen-Mei
Published in IEEE transactions on computers (01.12.2021)
Published in IEEE transactions on computers (01.12.2021)
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Journal Article
GPU accelerated biochemical network simulation
Zhou, Yanxiang, Liepe, Juliane, Sheng, Xia, Stumpf, Michael P. H., Barnes, Chris
Published in Bioinformatics (15.03.2011)
Published in Bioinformatics (15.03.2011)
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Journal Article
LogLoss-BERAF: An ensemble-based machine learning model for constructing highly accurate diagnostic sets of methylation sites accounting for heterogeneity in prostate cancer
Babalyan, K., Sultanov, R., Generozov, E., Sharova, E., Kostryukova, E., Larin, A., Kanygina, A., Govorun, V., Arapidi, G.
Published in PloS one (02.11.2018)
Published in PloS one (02.11.2018)
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Journal Article
A structural health monitoring Python code to detect small changes in frequencies
Nedelcu, Dorian, Gillich, Gilbert-Rainer
Published in Mechanical systems and signal processing (15.01.2021)
Published in Mechanical systems and signal processing (15.01.2021)
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Journal Article