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    Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors
                                      
                                            Peng, Yun,                              Gao, Shuzheng,                              Gao, Cuiyun,                              Huo, Yintong,                              Lyu, Michael R.                              
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
                   
      
      
                                                  Published in Proceedings / International Conference on Software Engineering (14.04.2024)
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              Conference Proceeding
          
              
          Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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              Journal Article
          
              
          PyBEST: Improved functionality and enhanced performance
                                      
                                            Boguslawski, Katharina,                              Brzęk, Filip,                              Chakraborty, Rahul,                              Cieślak, Kacper,                              Jahani, Seyedehdelaram,                              Leszczyk, Aleksandra,                              Nowak, Artur,                              Sujkowski, Emil,                              Świerczyński, Julian,                              Ahmadkhani, Somayeh,                              Kędziera, Dariusz,                              Kriebel, Maximilian H.,                              Żuchowski, Piotr Szymon,                              Tecmer, Paweł                              
Published in Computer physics communications (01.04.2024)
                   
      
      
                                                  Published in Computer physics communications (01.04.2024)
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              Journal Article
          
              
          K2 variable catalogue – II. Machine learning classification of variable stars and eclipsing binaries in K2 fields 0–4
                                      
                                            Armstrong, D. J.,                              Kirk, J.,                              Lam, K. W. F.,                              McCormac, J.,                              Osborn, H. P.,                              Spake, J.,                              Walker, S.,                              Brown, D. J. A.,                              Kristiansen, M. H.,                              Pollacco, D.,                              West, R.,                              Wheatley, P. J.                              
Published in Monthly notices of the Royal Astronomical Society (21.02.2016)
                   
      
      
                                                  Published in Monthly notices of the Royal Astronomical Society (21.02.2016)
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              Journal Article
          
              
          MetaLAFFA: a flexible, end-to-end, distributed computing-compatible metagenomic functional annotation pipeline
                                      
                                            Eng, Alexander,                              Verster, Adrian J.,                              Borenstein, Elhanan                              
Published in BMC bioinformatics (21.10.2020)
                   
      
      
                                                  Published in BMC bioinformatics (21.10.2020)
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              Journal Article
          
              
          PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
                                      
                                            Georgi, Benjamin,                              Costa, Ivan Gesteira,                              Schliep, Alexander                              
Published in BMC bioinformatics (06.01.2010)
                   
      
      
                                                  Published in BMC bioinformatics (06.01.2010)
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              Journal Article
          
              
          DASH: Deep Learning for the Automated Spectral Classification of Supernovae and Their Hosts
                                      
                                            Muthukrishna, Daniel,                              Parkinson, David,                              Tucker, Brad E.                              
Published in The Astrophysical journal (01.11.2019)
                   
      
      
                                                  Published in The Astrophysical journal (01.11.2019)
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              Journal Article
          
              
          GSEApy: a comprehensive package for performing gene set enrichment analysis in Python
                                      
                                            Fang, Zhuoqing,                              Liu, Xinyuan,                              Peltz, Gary                              
Published in Bioinformatics (Oxford, England) (01.01.2023)
                   
      
      
                                                  Published in Bioinformatics (Oxford, England) (01.01.2023)
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              Journal Article