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    PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
                                      
                                            Singh, Gursimran,                              Chharia, Aviral,                              Upadhyay, Rahul,                              Kumar, Vinay,                              Longo, Luca                              
Published in PloS one (06.08.2025)
                   
      
      
                                                  Published in PloS one (06.08.2025)
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              Journal Article
          
              
          MetPy: A Meteorological Python Library for Data Analysis and Visualization
                                      
                                            May, Ryan M.,                              Goebbert, Kevin H.,                              Thielen, Jonathan E.,                              Leeman, John R.,                              Camron, M. Drew,                              Bruick, Zachary,                              Bruning, Eric C.,                              Manser, Russell P.,                              Arms, Sean C.,                              Marsh, Patrick T.                              
Published in Bulletin of the American Meteorological Society (01.10.2022)
                   
      
      
                                                  Published in Bulletin of the American Meteorological Society (01.10.2022)
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              Journal Article
          
              
          APIScanner - Towards Automated Detection of Deprecated APIs in Python Libraries
                                      
                                            Vadlamani, Aparna,                              Kalicheti, Rishitha,                              Chimalakonda, Sridhar                              
Published in 2021 IEEE/ACM 43rd International Conference on Software Engineering: Companion Proceedings (ICSE-Companion) (01.05.2021)
                   
      
      
                                                  Published in 2021 IEEE/ACM 43rd International Conference on Software Engineering: Companion Proceedings (ICSE-Companion) (01.05.2021)
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              Conference Proceeding
          
              
          PEPMatch: a tool to identify short peptide sequence matches in large sets of proteins
                                      
                                            Marrama, Daniel,                              Chronister, William D.,                              Westernberg, Luise,                              Vita, Randi,                              Koşaloğlu-Yalçın, Zeynep,                              Sette, Alessandro,                              Nielsen, Morten,                              Greenbaum, Jason A.,                              Peters, Bjoern                              
Published in BMC bioinformatics (18.12.2023)
                   
      
      
                                                  Published in BMC bioinformatics (18.12.2023)
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              Journal Article
          
              
          SciKit Digital Health: Python Package for Streamlined Wearable Inertial Sensor Data Processing
                                      
                                            Adamowicz, Lukas,                              Christakis, Yiorgos,                              Czech, Matthew D,                              Adamusiak, Tomasz                              
Published in JMIR mHealth and uHealth (21.04.2022)
                   
      
      
                                                  Published in JMIR mHealth and uHealth (21.04.2022)
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              Journal Article
          
              
          New Python-based methods for data processing
                                      
                                            Sauter, Nicholas K.,                              Hattne, Johan,                              Grosse-Kunstleve, Ralf W.,                              Echols, Nathaniel                              
Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
                   
      
      
                                                  Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
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              Journal Article
          
              
          A conversion tool for translating Python-based machine learning models to structured text codes
                                      
                                            Campos, Yasmin Adriane de Paula,                              Pereira, Paulo Haron da Silva,                              Duarte, Robson Aparecido,                              Perez, José Manuel Gonzalez Túbio,                              Pessin, Gustavo,                              Pinto, Thomas Vargas Barsante                              
Published in SoftwareX (01.02.2025)
                   
      
      
                                                  Published in SoftwareX (01.02.2025)
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              Journal Article
          
              
          Split Pool Ligation-based Single-cell Transcriptome sequencing (SPLiT-seq) data processing pipeline comparison
                                      
                                            Kuijpers, Lucas,                              Hornung, Bastian,                              van den Hout - van Vroonhoven, Mirjam C. G. N.,                              van IJcken, Wilfred F. J.,                              Grosveld, Frank,                              Mulugeta, Eskeatnaf                              
Published in BMC genomics (12.04.2024)
                   
      
      
                                                  Published in BMC genomics (12.04.2024)
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              Journal Article
          
              
          GSEApy: a comprehensive package for performing gene set enrichment analysis in Python
                                      
                                            Fang, Zhuoqing,                              Liu, Xinyuan,                              Peltz, Gary                              
Published in Bioinformatics (Oxford, England) (01.01.2023)
                   
      
      
                                                  Published in Bioinformatics (Oxford, England) (01.01.2023)
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              Journal Article
          
              
          Towards artificial general intelligence with hybrid Tianjic chip architecture
                                      
                                            Pei, Jing,                              Deng, Lei,                              Song, Sen,                              Zhao, Mingguo,                              Zhang, Youhui,                              Wu, Shuang,                              Wang, Guanrui,                              Zou, Zhe,                              Wu, Zhenzhi,                              He, Wei,                              Chen, Feng,                              Deng, Ning,                              Wu, Si,                              Wang, Yu,                              Wu, Yujie,                              Yang, Zheyu,                              Ma, Cheng,                              Li, Guoqi,                              Han, Wentao,                              Li, Huanglong,                              Wu, Huaqiang,                              Zhao, Rong,                              Xie, Yuan,                              Shi, Luping                              
Published in Nature (London) (01.08.2019)
                   
      
      
                                                  Published in Nature (London) (01.08.2019)
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              Journal Article
          
              
          Bioinformatic pipelines in Python with Leaf
                                      
                                            Napolitano, Francesco,                              Mariani-Costantini, Renato,                              Tagliaferri, Roberto                              
Published in BMC bioinformatics (21.06.2013)
                   
      
      
                                                  Published in BMC bioinformatics (21.06.2013)
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              Journal Article