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Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
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Journal Article
Sb 2 S 3 -Based Dynamically Tuned Color Filter Array via Genetic Algorithm
Wei, Xueling, Nong, Jie, Zhang, Yiyi, Ma, Hansi, Huang, Rixing, Yuan, Zhenkun, Zhang, Zhenfu, Zhang, Zhenrong, Yang, Junbo
Published in Nanomaterials (Basel, Switzerland) (24.04.2023)
Published in Nanomaterials (Basel, Switzerland) (24.04.2023)
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Journal Article
Sb[sub.2]S[sub.3]-Based Dynamically Tuned Color Filter Array via Genetic Algorithm
Wei, Xueling, Nong, Jie, Zhang, Yiyi, Ma, Hansi, Huang, Rixing, Yuan, Zhenkun, Zhang, Zhenfu, Zhang, Zhenrong, Yang, Junbo
Published in Nanomaterials (Basel, Switzerland) (01.04.2023)
Published in Nanomaterials (Basel, Switzerland) (01.04.2023)
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Journal Article
PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
Singh, Gursimran, Chharia, Aviral, Upadhyay, Rahul, Kumar, Vinay, Longo, Luca
Published in PloS one (06.08.2025)
Published in PloS one (06.08.2025)
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Journal Article
Image processing for electron microscopy single-particle analysis using XMIPP
Scheres, Sjors H W, Núñez-Ramírez, Rafael, Sorzano, Carlos O S, Carazo, José María, Marabini, Roberto
Published in Nature protocols (01.06.2008)
Published in Nature protocols (01.06.2008)
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Journal Article
Bioinformatic pipelines in Python with Leaf
Napolitano, Francesco, Mariani-Costantini, Renato, Tagliaferri, Roberto
Published in BMC bioinformatics (21.06.2013)
Published in BMC bioinformatics (21.06.2013)
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Journal Article
PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
Georgi, Benjamin, Costa, Ivan Gesteira, Schliep, Alexander
Published in BMC bioinformatics (06.01.2010)
Published in BMC bioinformatics (06.01.2010)
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Journal Article
Comparison of the pyGIMLi and BERT packages for landslide and cavity detection: A case study from Tghat-Oued Fez, Morocco
Jabrane, Oussama, El Azzab, Driss, Martínez-Pagán, Pedro, Charroud, Mohammed, El Mansouri, Bouabid, Martínez-Segura, Marcos A, Himi, Mahjoub, Elgettafi, Mohammed
Published in Journal of Earth System Science (01.09.2023)
Published in Journal of Earth System Science (01.09.2023)
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Journal Article
Uncovering structural ensembles from single-particle cryo-EM data using cryoDRGN
Kinman, Laurel F., Powell, Barrett M., Zhong, Ellen D., Berger, Bonnie, Davis, Joseph H.
Published in Nature protocols (01.02.2023)
Published in Nature protocols (01.02.2023)
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Journal Article