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    PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
                                      
                                            Singh, Gursimran,                              Chharia, Aviral,                              Upadhyay, Rahul,                              Kumar, Vinay,                              Longo, Luca                              
Published in PloS one (06.08.2025)
                   
      
      
                                                  Published in PloS one (06.08.2025)
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          PHOTONAI—A Python API for rapid machine learning model development
                                      
                                            Leenings, Ramona,                              Winter, Nils Ralf,                              Plagwitz, Lucas,                              Holstein, Vincent,                              Ernsting, Jan,                              Sarink, Kelvin,                              Fisch, Lukas,                              Steenweg, Jakob,                              Kleine-Vennekate, Leon,                              Gebker, Julian,                              Emden, Daniel,                              Grotegerd, Dominik,                              Opel, Nils,                              Risse, Benjamin,                              Jiang, Xiaoyi,                              Dannlowski, Udo,                              Hahn, Tim                              
Published in PloS one (21.07.2021)
                   
      
      
                                                  Published in PloS one (21.07.2021)
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          COBRApy: COnstraints-Based Reconstruction and Analysis for Python
                                      
                                            Ebrahim, Ali,                              Lerman, Joshua A,                              Palsson, Bernhard O,                              Hyduke, Daniel R                              
Published in BMC systems biology (08.08.2013)
                   
      
      
                                                  Published in BMC systems biology (08.08.2013)
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          SPOTting Model Parameters Using a Ready-Made Python Package
                                      
                                            Houska, Tobias,                              Kraft, Philipp,                              Chamorro-Chavez, Alejandro,                              Breuer, Lutz                              
Published in PloS one (17.12.2015)
                   
      
      
                                                  Published in PloS one (17.12.2015)
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          Introducing GPU Acceleration into the Python-Based Simulations of Chemistry Framework
                                      
                                            Li, Rui,                              Sun, Qiming,                              Zhang, Xing,                              Chan, Garnet Kin-Lic                              
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (06.02.2025)
                   
      
      
                                                  Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (06.02.2025)
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          pyNBS: a Python implementation for network-based stratification of tumor mutations
                                      
                                            Huang, Justin K,                              Jia, Tongqiu,                              Carlin, Daniel E,                              Ideker, Trey                              
Published in Bioinformatics (15.08.2018)
                   
      
      
                                                  Published in Bioinformatics (15.08.2018)
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          2FAST2Q: a general-purpose sequence search and counting program for FASTQ files
                                      
                                            Bravo, Afonso M.,                              Typas, Athanasios,                              Veening, Jan-Willem                              
Published in PeerJ (San Francisco, CA) (25.10.2022)
                   
      
      
                                                  Published in PeerJ (San Francisco, CA) (25.10.2022)
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          pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment
                                      
                                            Warris, Sven,                              Timal, N. Roshan N.,                              Kempenaar, Marcel,                              Poortinga, Arne M.,                              van de Geest, Henri,                              Varbanescu, Ana L.,                              Nap, Jan-Peter                              
Published in PloS one (02.01.2018)
                   
      
      
                                                  Published in PloS one (02.01.2018)
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          ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data
                                      
                                            Zagordi, Osvaldo,                              Bhattacharya, Arnab,                              Eriksson, Nicholas,                              Beerenwinkel, Niko                              
Published in BMC bioinformatics (26.04.2011)
                   
      
      
                                                  Published in BMC bioinformatics (26.04.2011)
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          Navigating AI: A Quick Start Guide for Healthcare Professionals
                                      
                                            Mathur, Piyush,                              Arshad, Hajra,                              Grasfield, Rachel,                              Khatib, Reem,                              Aggarwal, Avneep,                              Auron, Moises,                              Khare, Avneesh                              
Published in Curēus (Palo Alto, CA) (27.10.2024)
                   
      
      
                                                  Published in Curēus (Palo Alto, CA) (27.10.2024)
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          MetPy: A Meteorological Python Library for Data Analysis and Visualization
                                      
                                            May, Ryan M.,                              Goebbert, Kevin H.,                              Thielen, Jonathan E.,                              Leeman, John R.,                              Camron, M. Drew,                              Bruick, Zachary,                              Bruning, Eric C.,                              Manser, Russell P.,                              Arms, Sean C.,                              Marsh, Patrick T.                              
Published in Bulletin of the American Meteorological Society (01.10.2022)
                   
      
      
                                                  Published in Bulletin of the American Meteorological Society (01.10.2022)
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          An Introduction to Programming for Bioscientists: A Python-Based Primer
                                      
                                            Ekmekci, Berk,                              McAnany, Charles E.,                              Mura, Cameron                              
Published in PLoS computational biology (01.06.2016)
                   
      
      
                                                  Published in PLoS computational biology (01.06.2016)
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          New Python-based methods for data processing
                                      
                                            Sauter, Nicholas K.,                              Hattne, Johan,                              Grosse-Kunstleve, Ralf W.,                              Echols, Nathaniel                              
Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
                   
      
      
                                                  Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
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