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PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
Singh, Gursimran, Chharia, Aviral, Upadhyay, Rahul, Kumar, Vinay, Longo, Luca
Published in PloS one (06.08.2025)
Published in PloS one (06.08.2025)
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Journal Article
PHOTONAI—A Python API for rapid machine learning model development
Leenings, Ramona, Winter, Nils Ralf, Plagwitz, Lucas, Holstein, Vincent, Ernsting, Jan, Sarink, Kelvin, Fisch, Lukas, Steenweg, Jakob, Kleine-Vennekate, Leon, Gebker, Julian, Emden, Daniel, Grotegerd, Dominik, Opel, Nils, Risse, Benjamin, Jiang, Xiaoyi, Dannlowski, Udo, Hahn, Tim
Published in PloS one (21.07.2021)
Published in PloS one (21.07.2021)
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Journal Article
COBRApy: COnstraints-Based Reconstruction and Analysis for Python
Ebrahim, Ali, Lerman, Joshua A, Palsson, Bernhard O, Hyduke, Daniel R
Published in BMC systems biology (08.08.2013)
Published in BMC systems biology (08.08.2013)
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Journal Article
SPOTting Model Parameters Using a Ready-Made Python Package
Houska, Tobias, Kraft, Philipp, Chamorro-Chavez, Alejandro, Breuer, Lutz
Published in PloS one (17.12.2015)
Published in PloS one (17.12.2015)
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Journal Article
pyNBS: a Python implementation for network-based stratification of tumor mutations
Huang, Justin K, Jia, Tongqiu, Carlin, Daniel E, Ideker, Trey
Published in Bioinformatics (15.08.2018)
Published in Bioinformatics (15.08.2018)
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Journal Article
pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment
Warris, Sven, Timal, N. Roshan N., Kempenaar, Marcel, Poortinga, Arne M., van de Geest, Henri, Varbanescu, Ana L., Nap, Jan-Peter
Published in PloS one (02.01.2018)
Published in PloS one (02.01.2018)
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Journal Article
ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data
Zagordi, Osvaldo, Bhattacharya, Arnab, Eriksson, Nicholas, Beerenwinkel, Niko
Published in BMC bioinformatics (26.04.2011)
Published in BMC bioinformatics (26.04.2011)
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Journal Article
Navigating AI: A Quick Start Guide for Healthcare Professionals
Mathur, Piyush, Arshad, Hajra, Grasfield, Rachel, Khatib, Reem, Aggarwal, Avneep, Auron, Moises, Khare, Avneesh
Published in Curēus (Palo Alto, CA) (27.10.2024)
Published in Curēus (Palo Alto, CA) (27.10.2024)
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Journal Article
PyBEST: Improved functionality and enhanced performance
Boguslawski, Katharina, Brzęk, Filip, Chakraborty, Rahul, Cieślak, Kacper, Jahani, Seyedehdelaram, Leszczyk, Aleksandra, Nowak, Artur, Sujkowski, Emil, Świerczyński, Julian, Ahmadkhani, Somayeh, Kędziera, Dariusz, Kriebel, Maximilian H., Żuchowski, Piotr Szymon, Tecmer, Paweł
Published in Computer physics communications (01.04.2024)
Published in Computer physics communications (01.04.2024)
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Journal Article
Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
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Journal Article