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pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods
Behdenna, Abdelkader, Colange, Maximilien, Haziza, Julien, Gema, Aryo, Appé, Guillaume, Azencott, Chloé-Agathe, Nordor, Akpéli
Published in BMC bioinformatics (07.12.2023)
Published in BMC bioinformatics (07.12.2023)
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Journal Article
Development and evaluation of GIS-based runoff and sediment yield watershed scale model
Yousuf, Abrar, Bhardwaj, Anil, Yousuf, Faizaan
Published in Arabian journal of geosciences (01.10.2022)
Published in Arabian journal of geosciences (01.10.2022)
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Journal Article
GPU-accelerated real-time reconstruction in Python of three-dimensional datasets from structured illumination microscopy with hexagonal patterns
Gong, Hai, Guo, Wenjun, Neil, Mark A. A.
Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (14.06.2021)
Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (14.06.2021)
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Journal Article
Prediction of stunting and its socioeconomic determinants among adolescent girls in Ethiopia using machine learning algorithms
Zemariam, Alemu Birara, Abate, Biruk Beletew, Alamaw, Addis Wondmagegn, Lake, Eyob shitie, Yilak, Gizachew, Ayele, Mulat, Tilahun, Befkad Derese, Ngusie, Habtamu Setegn
Published in PloS one (24.01.2025)
Published in PloS one (24.01.2025)
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Journal Article
Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
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Journal Article
Colonyzer: automated quantification of micro-organism growth characteristics on solid agar
Lawless, Conor, Wilkinson, Darren J, Young, Alexander, Addinall, Stephen G, Lydall, David A
Published in BMC bioinformatics (28.05.2010)
Published in BMC bioinformatics (28.05.2010)
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Journal Article
Rationale and Application of the Protocol S Anti–Vascular Endothelial Growth Factor Algorithm for Proliferative Diabetic Retinopathy
Sun, Jennifer K., Glassman, Adam R., Beaulieu, Wesley T., Stockdale, Cynthia R., Bressler, Neil M., Flaxel, Christina, Gross, Jeffrey G., Shami, Michel, Jampol, Lee M.
Published in Ophthalmology (Rochester, Minn.) (01.01.2019)
Published in Ophthalmology (Rochester, Minn.) (01.01.2019)
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Journal Article
Machine learning-based prediction of distant metastasis risk in invasive ductal carcinoma of the breast
Dong, Jingru, Lei, Ruijiao, Ma, Feiyang, Yu, Lu, Wang, Lanlan, Xu, Shangzhi, Hu, Yunhua, Sun, Jialin, Zhang, Wenwen, Wang, Haixia, Zhang, Li
Published in PloS one (26.02.2025)
Published in PloS one (26.02.2025)
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Journal Article
A predictive model for recurrence in patients with borderline ovarian tumor based on neural multi-task logistic regression
Ye, Qiulin, Qi, Yue, Liu, Juanjuan, Hu, Yuexin, Li, Xiao, Guo, Qian, Zhang, Danye, Lin, Bei
Published in BMC cancer (17.02.2025)
Published in BMC cancer (17.02.2025)
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Journal Article
An improved r‐factor algorithm for total variational diminishing (TVD) schemes on two‐dimension non‐uniform unstructured grids
Li, Jie, Zhang, Quan, Zhai, Zhi‐Qiang( John), Sun, Xiaoqin, Liao, Shuguang
Published in International journal for numerical methods in fluids (01.05.2021)
Published in International journal for numerical methods in fluids (01.05.2021)
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Journal Article