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    Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors
                                      
                                            Peng, Yun,                              Gao, Shuzheng,                              Gao, Cuiyun,                              Huo, Yintong,                              Lyu, Michael R.                              
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
                   
      
      
                                                  Published in Proceedings / International Conference on Software Engineering (14.04.2024)
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              Conference Proceeding
          
              
          Python tools for structural tasks in chemistry
                                      
                                            Ryzhkov, Fedor V.,                              Ryzhkova, Yuliya E.,                              Elinson, Michail N.                              
Published in Molecular diversity (01.08.2025)
                   
      
      
                                                  Published in Molecular diversity (01.08.2025)
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              Journal Article
          
              
          Comparative Analysis of AI Models for Python Code Generation: A HumanEval Benchmark Study
                                      
                                            Bayram, Ali,                              Menekse Dalveren, Gonca Gokce,                              Derawi, Mohammad                              
Published in Applied sciences (10.09.2025)
                   
      
      
                                                  Published in Applied sciences (10.09.2025)
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              Journal Article
          
              
          Increasing tendency of urine protein is a risk factor for rapid eGFR decline in patients with CKD: A machine learning-based prediction model by using a big database
                                      
                                            Inaguma, Daijo,                              Kitagawa, Akimitsu,                              Yanagiya, Ryosuke,                              Koseki, Akira,                              Iwamori, Toshiya,                              Kudo, Michiharu,                              Yuzawa, Yukio                              
Published in PLoS ONE (17.09.2020)
                   
      
      
                                                  Published in PLoS ONE (17.09.2020)
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              Journal Article
          
              
          PODPAC: open-source Python software for enabling harmonized, plug-and-play processing of disparate earth observation data sets and seamless transition onto the serverless cloud by earth scientists
                                      
                                            Ueckermann, Mattheus P.,                              Bieszczad, Jerry,                              Entekhabi, Dara,                              Shapiro, Marc L.,                              Callendar, David R.,                              Sullivan, David,                              Milloy, Jeffrey                              
Published in Earth science informatics (01.12.2020)
                   
      
      
                                                  Published in Earth science informatics (01.12.2020)
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              Journal Article
          
              
          A novel fractal interpolation function algorithm for fractal dimension estimation and coastline geometry reconstruction: a case study of the coastline of Kingdom of Saudi Arabia
                                      
                                            Husain, Akhlaq,                              Gumma, Suhas,                              Sajid, Mohammad,                              Reddy, Jaideep,                              Alresheedi, Mohammad T.                              
Published in The European physical journal. B, Condensed matter physics (01.04.2024)
                   
      
      
                                                  Published in The European physical journal. B, Condensed matter physics (01.04.2024)
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              Journal Article
          
              
          astrophot: fitting everything everywhere all at once in astronomical images
                                      
                                            Stone, Connor J,                              Courteau, Stéphane,                              Cuillandre, Jean-Charles,                              Hezaveh, Yashar,                              Perreault-Levasseur, Laurence,                              Arora, Nikhil                              
Published in Monthly notices of the Royal Astronomical Society (01.11.2023)
                   
      
      
                                                  Published in Monthly notices of the Royal Astronomical Society (01.11.2023)
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              Journal Article
          
              
          PyLog: An Algorithm-Centric Python-Based FPGA Programming and Synthesis Flow
                                      
                                            Huang, Sitao,                              Wu, Kun,                              Jeong, Hyunmin,                              Wang, Chengyue,                              Chen, Deming,                              Hwu, Wen-Mei                              
Published in IEEE transactions on computers (01.12.2021)
                   
      
      
                                                  Published in IEEE transactions on computers (01.12.2021)
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              Journal Article
          
              
          Code Generation for Productive, Portable, and Scalable Finite Element Simulation in Firedrake
                                      
                                            Betteridge, Jack D.,                              Farrell, Patrick E.,                              Ham, David A.                              
Published in Computing in science & engineering (01.07.2021)
                   
      
      
                                                  Published in Computing in science & engineering (01.07.2021)
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              Journal Article
          
              
          MetPy: A Meteorological Python Library for Data Analysis and Visualization
                                      
                                            May, Ryan M.,                              Goebbert, Kevin H.,                              Thielen, Jonathan E.,                              Leeman, John R.,                              Camron, M. Drew,                              Bruick, Zachary,                              Bruning, Eric C.,                              Manser, Russell P.,                              Arms, Sean C.,                              Marsh, Patrick T.                              
Published in Bulletin of the American Meteorological Society (01.10.2022)
                   
      
      
                                                  Published in Bulletin of the American Meteorological Society (01.10.2022)
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              Journal Article
          
              
          PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
                                      
                                            Singh, Gursimran,                              Chharia, Aviral,                              Upadhyay, Rahul,                              Kumar, Vinay,                              Longo, Luca                              
Published in PloS one (06.08.2025)
                   
      
      
                                                  Published in PloS one (06.08.2025)
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          scTPC: a novel semisupervised deep clustering model for scRNA-seq data
                                      
                                            Qiu, Yushan,                              Yang, Lingfei,                              Jiang, Hao,                              Zou, Quan                              
Published in Bioinformatics (Oxford, England) (02.05.2024)
                   
      
      
                                                  Published in Bioinformatics (Oxford, England) (02.05.2024)
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          pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods
                                      
                                            Behdenna, Abdelkader,                              Colange, Maximilien,                              Haziza, Julien,                              Gema, Aryo,                              Appé, Guillaume,                              Azencott, Chloé-Agathe,                              Nordor, Akpéli                              
Published in BMC bioinformatics (07.12.2023)
                   
      
      
                                                  Published in BMC bioinformatics (07.12.2023)
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              Journal Article