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PHOTONAI—A Python API for rapid machine learning model development

by Leenings, Ramona, Winter, Nils Ralf, Plagwitz, Lucas, Holstein, Vincent, Ernsting, Jan, Sarink, Kelvin, Fisch, Lukas, Steenweg, Jakob, Kleine-Vennekate, Leon, Gebker, Julian, Emden, Daniel, Grotegerd, Dominik, Opel, Nils, Risse, Benjamin, Jiang, Xiaoyi, Dannlowski, Udo, Hahn, Tim
Published in PloS one (21.07.2021)

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MEG and EEG data analysis with MNE-Python

by Gramfort, Alexandre
Published in Frontiers in neuroscience (26.12.2013)

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PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces

by Singh, Gursimran, Chharia, Aviral, Upadhyay, Rahul, Kumar, Vinay, Longo, Luca
Published in PloS one (06.08.2025)

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Gnocis: An integrated system for interactive and reproducible analysis and modelling of cis-regulatory elements in Python 3

by Bredesen-Aa, Bjørn André, Rehmsmeier, Marc
Published in PloS one (09.09.2022)

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SciPy 1.0: fundamental algorithms for scientific computing in Python

by Virtanen, Pauli, Gommers, Ralf, Oliphant, Travis E., Haberland, Matt, Reddy, Tyler, Cournapeau, David, Burovski, Evgeni, Peterson, Pearu, Weckesser, Warren, Bright, Jonathan, van der Walt, Stéfan J., Brett, Matthew, Wilson, Joshua, Millman, K. Jarrod, Mayorov, Nikolay, Nelson, Andrew R. J., Jones, Eric, Kern, Robert, Larson, Eric, Carey, C J, Polat, İlhan, Feng, Yu, Moore, Eric W., VanderPlas, Jake, Laxalde, Denis, Perktold, Josef, Cimrman, Robert, Henriksen, Ian, Quintero, E. A., Harris, Charles R., Archibald, Anne M., Ribeiro, Antônio H., Pedregosa, Fabian, van Mulbregt, Paul
Published in Nature methods (01.03.2020)

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Mahakala: A Python-based Modular Ray-tracing and Radiative Transfer Algorithm for Curved Spacetimes

by Sharma, Aniket, Medeiros, Lia, Wong, George N., Chan, Chi-kwan, Halevi, Goni, Mullen, Patrick D., Stone, James M.
Published in The Astrophysical journal (20.05.2025)

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Biotite: a unifying open source computational biology framework in Python

by Kunzmann, Patrick, Hamacher, Kay
Published in BMC bioinformatics (01.10.2018)

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Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors

by Peng, Yun, Gao, Shuzheng, Gao, Cuiyun, Huo, Yintong, Lyu, Michael R.
Published in Proceedings / International Conference on Software Engineering (14.04.2024)

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Conference Proceeding

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A neural algorithm for computing bipartite matchings

by Dasgupta, Sanjoy, Meirovitch, Yaron, Zheng, Xingyu, Bush, Inle, Lichtman, Jeff W., Navlakha, Saket
Published in Proceedings of the National Academy of Sciences - PNAS (10.09.2024)

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Bayesian neural networks via MCMC: a Python-based tutorial

by Chandra, Rohitash, Simmons, Joshua
Published in IEEE access (01.01.2024)

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Using python libraries and k-Nearest neighbors algorithms to delineate syn-sedimentary faults in sedimentary porous media

by Martín-Martín, Manuel, Bullejos, Manuel, Cabezas, David, Alcalá, Francisco Javier
Published in Marine and petroleum geology (01.07.2023)

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Data Structures and Program Design Using Python - A Self-Teaching Introduction

by Malhotra, D, Malhotra, N
Year of Publication 2021

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eBook

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Comparison of Image-Based and Text-Based Source Code Classification Using Deep Learning

by Kiyak, Elife Ozturk, Cengiz, Ayse Betul, Birant, Kokten Ulas, Birant, Derya
Published in SN computer science (01.09.2020)

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COBRApy: COnstraints-Based Reconstruction and Analysis for Python

by Ebrahim, Ali, Lerman, Joshua A, Palsson, Bernhard O, Hyduke, Daniel R
Published in BMC systems biology (08.08.2013)

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Journal Article

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Correct orchestration of federated learning generic algorithms: Python translation to CSP and verification by PAT

by Djukic, Miodrag, Prokić, Ivan, Popovic, Miroslav, Ghilezan, Silvia, Popovic, Marko, Prokić, Simona
Published in International journal on software tools for technology transfer (01.02.2025)

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Deep Learning for Beginners: A Beginner's Guide to Getting up and Running with Deep Learning from Scratch Using Python

by Rivas, Pablo
Year of Publication 2020

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eBook

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SPOTting Model Parameters Using a Ready-Made Python Package

by Houska, Tobias, Kraft, Philipp, Chamorro-Chavez, Alejandro, Breuer, Lutz
Published in PloS one (17.12.2015)

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FalseColor-Python: A rapid intensity-leveling and digital-staining package for fluorescence-based slide-free digital pathology

by Serafin, Robert, Xie, Weisi, Glaser, Adam K., Liu, Jonathan T. C.
Published in PloS one (01.10.2020)

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Normscan: open-source Python software to create average models from CT scans

by Nahass, George R., Marques, Mitchell A., Bou Zeid, Naji, Zhao, Linping, Alkureishi, Lee W. T.
Published in International journal for computer assisted radiology and surgery (01.01.2025)

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Navigating AI: A Quick Start Guide for Healthcare Professionals

by Mathur, Piyush, Arshad, Hajra, Grasfield, Rachel, Khatib, Reem, Aggarwal, Avneep, Auron, Moises, Khare, Avneesh
Published in Curēus (Palo Alto, CA) (27.10.2024)

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