Vyzkoušejte nový nástroj s podporou AI
Summon Research Assistant
BETA
Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
Get full text
Journal Article
Biotite: new tools for a versatile Python bioinformatics library
Kunzmann, Patrick, Müller, Tom David, Greil, Maximilian, Krumbach, Jan Hendrik, Anter, Jacob Marcel, Bauer, Daniel, Islam, Faisal, Hamacher, Kay
Published in BMC bioinformatics (05.06.2023)
Published in BMC bioinformatics (05.06.2023)
Get full text
Journal Article
RABiTPy: an open-source Python software for rapid, AI-powered bacterial tracking and analysis
Sen, Samyabrata, Vairagare, Indraneel, Gosai, Jitendrapuri, Shrivastava, Abhishek
Published in BMC bioinformatics (18.05.2025)
Published in BMC bioinformatics (18.05.2025)
Get full text
Journal Article
SciPy 1.0: fundamental algorithms for scientific computing in Python
Virtanen, Pauli, Gommers, Ralf, Oliphant, Travis E., Haberland, Matt, Reddy, Tyler, Cournapeau, David, Burovski, Evgeni, Peterson, Pearu, Weckesser, Warren, Bright, Jonathan, van der Walt, Stéfan J., Brett, Matthew, Wilson, Joshua, Millman, K. Jarrod, Mayorov, Nikolay, Nelson, Andrew R. J., Jones, Eric, Kern, Robert, Larson, Eric, Carey, C J, Polat, İlhan, Feng, Yu, Moore, Eric W., VanderPlas, Jake, Laxalde, Denis, Perktold, Josef, Cimrman, Robert, Henriksen, Ian, Quintero, E. A., Harris, Charles R., Archibald, Anne M., Ribeiro, Antônio H., Pedregosa, Fabian, van Mulbregt, Paul
Published in Nature methods (01.03.2020)
Published in Nature methods (01.03.2020)
Get full text
Journal Article
Improved social network search algorithm coupled with Lagrange method for extracting the best parameter of photovoltaic modules and array
Gnetchejo, Patrick Juvet, Ndjakomo Essiane, Salomé, Dadjé, Abdouramani, Mbadjoun Wapet, Daniel Eutyche, Ele, Pierre, Chen, Zhicong
Published in International journal of energy and environmental engineering (01.09.2023)
Published in International journal of energy and environmental engineering (01.09.2023)
Get full text
Journal Article
Portable BLAST-like algorithm library and its implementations for command line, Python, and R
Schmid, Steven, Jeevannavar, Aditya, Julian, Timothy R., Tamminen, Manu
Published in PloS one (30.11.2023)
Published in PloS one (30.11.2023)
Get full text
Journal Article
Mugen-UMAP: UMAP visualization and clustering of mutated genes in single-cell DNA sequencing data
Li, Teng, Zou, Yiran, Li, Xianghan, Wong, Thomas K. F., Rodrigo, Allen G.
Published in BMC bioinformatics (27.09.2024)
Published in BMC bioinformatics (27.09.2024)
Get full text
Journal Article
PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
Georgi, Benjamin, Costa, Ivan Gesteira, Schliep, Alexander
Published in BMC bioinformatics (06.01.2010)
Published in BMC bioinformatics (06.01.2010)
Get full text
Journal Article
OMD Curation Toolkit: a workflow for in-house curation of public omics datasets
Piquer-Esteban, Samuel, Arnau, Vicente, Diaz, Wladimiro, Moya, Andrés
Published in BMC bioinformatics (09.05.2024)
Published in BMC bioinformatics (09.05.2024)
Get full text
Journal Article
RNA-Seq Mapping and Detection of Gene Fusions with a Suffix Array Algorithm
Sakarya, Onur, Breu, Heinz, Radovich, Milan, Chen, Yongzhi, Wang, Yulei N., Barbacioru, Catalin, Utiramerur, Sowmi, Whitley, Penn P., Brockman, Joel P., Vatta, Paolo, Zhang, Zheng, Popescu, Liviu, Muller, Matthew W., Kudlingar, Vidya, Garg, Nriti, Li, Chieh-Yuan, Kong, Benjamin S., Bodeau, John P., Nutter, Robert C., Gu, Jian, Bramlett, Kelli S., Ichikawa, Jeffrey K., Hyland, Fiona C., Siddiqui, Asim S.
Published in PLoS computational biology (01.04.2012)
Published in PLoS computational biology (01.04.2012)
Get full text
Journal Article
Partial Covering Arrays: Algorithms and Asymptotics
Sarkar, Kaushik, Colbourn, Charles J., De Bonis, Annalisa, Vaccaro, Ugo
Published in Theory of computing systems (01.08.2018)
Published in Theory of computing systems (01.08.2018)
Get full text
Journal Article
Toward a unified framework for interpreting machine-learning models in neuroimaging
Kohoutová, Lada, Heo, Juyeon, Cha, Sungmin, Lee, Sungwoo, Moon, Taesup, Wager, Tor D., Woo, Choong-Wan
Published in Nature protocols (01.04.2020)
Published in Nature protocols (01.04.2020)
Get full text
Journal Article
Bioinformatic pipelines in Python with Leaf
Napolitano, Francesco, Mariani-Costantini, Renato, Tagliaferri, Roberto
Published in BMC bioinformatics (21.06.2013)
Published in BMC bioinformatics (21.06.2013)
Get full text
Journal Article