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MetPy: A Meteorological Python Library for Data Analysis and Visualization

by May, Ryan M., Goebbert, Kevin H., Thielen, Jonathan E., Leeman, John R., Camron, M. Drew, Bruick, Zachary, Bruning, Eric C., Manser, Russell P., Arms, Sean C., Marsh, Patrick T.
Published in Bulletin of the American Meteorological Society (01.10.2022)

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pyKVFinder: an efficient and integrable Python package for biomolecular cavity detection and characterization in data science

by Guerra, João Victor da Silva, Ribeiro-Filho, Helder Veras, Jara, Gabriel Ernesto, Bortot, Leandro Oliveira, Pereira, José Geraldo de Carvalho, Lopes-de-Oliveira, Paulo Sérgio
Published in BMC bioinformatics (20.12.2021)

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Surface-wave tomography using SeisLib: a Python package for multiscale seismic imaging

by Magrini, Fabrizio, Lauro, Sebastian, Kästle, Emanuel, Boschi, Lapo
Published in Geophysical journal international (23.07.2022)

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Coding recognition of the dose–effect interdependence of small biomolecules encrypted on paired chromatographic-based microassay arrays: Coding recognition of the dose–effect interdependence of small biomolecules encrypted on paired chromatographic-based microassay arrays

by Deng, Yifeng, Lin, Zhenpeng, Cheng, Yuan
Published in Analytical and bioanalytical chemistry (01.08.2022)

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ETE: a python Environment for Tree Exploration

by Huerta-Cepas, Jaime, Dopazo, Joaquín, Gabaldón, Toni
Published in BMC bioinformatics (13.01.2010)

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Universal Algorithm for Simulating and Evaluating Cyclic Voltammetry at Macroporous Electrodes by Considering Random Arrays of Microelectrodes

by Tichter, Tim, Schneider, Jonathan, Andrae, Dirk, Gebhard, Marcus, Roth, Christina
Published in Chemphyschem (04.03.2020)

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PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces

by Singh, Gursimran, Chharia, Aviral, Upadhyay, Rahul, Kumar, Vinay, Longo, Luca
Published in PloS one (06.08.2025)

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Non-circular signals for nested array: sum–difference co-array and direction of arrival estimation algorithm

by Yunfei, Wang, Jinqing, Shen, Xiaofei, Zhang, Yi, He, Xiangrui, Dai
Published in IET radar, sonar & navigation (01.01.2020)

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PyAGH: a python package to fast construct kinship matrices based on different levels of omic data

by Zhao, Wei, Qadri, Qamar Raza, Zhang, Zhenyang, Wang, Zhen, Pan, Yuchun, Wang, Qishan, Zhang, Zhe
Published in BMC bioinformatics (18.04.2023)

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Python for MATLAB Development - Extend MATLAB with 300,000+ Modules from the Python Package Index

by Danial, Albert
Year of Publication 2022

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Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS

by Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)

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A Python Clustering Analysis Protocol of Genes Expression Data Sets

by Agapito, Giuseppe, Milano, Marianna, Cannataro, Mario
Published in Genes (12.10.2022)

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Python: An Ecosystem for Scientific Computing

by Perez, Fernando, Granger, Brian E., Hunter, John D.
Published in Computing in science & engineering (01.03.2011)

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New Python-based methods for data processing

by Sauter, Nicholas K., Hattne, Johan, Grosse-Kunstleve, Ralf W., Echols, Nathaniel
Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)

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GReNaDIne: A Data-Driven Python Library to Infer Gene Regulatory Networks from Gene Expression Data

by Schmitt, Pauline, Sorin, Baptiste, Frouté, Timothée, Parisot, Nicolas, Calevro, Federica, Peignier, Sergio
Published in Genes (20.01.2023)

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OPARC: Optimal and Precise Array Response Control Algorithm-Part I: Fundamentals

by Zhang, Xuejing, He, Zishu, Xia, Xiang-Gen, Liao, Bin, Zhang, Xuepan, Yang, Yue
Published in IEEE transactions on signal processing (01.02.2019)

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PyMS: a Python toolkit for processing of gas chromatography-mass spectrometry (GC-MS) data. Application and comparative study of selected tools

by O'Callaghan, Sean, De Souza, David P, Isaac, Andrew, Wang, Qiao, Hodkinson, Luke, Olshansky, Moshe, Erwin, Tim, Appelbe, Bill, Tull, Dedreia L, Roessner, Ute, Bacic, Antony, McConville, Malcolm J, Likić, Vladimir A
Published in BMC bioinformatics (30.05.2012)

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Microarray Image Lossless Compression Using General Entropy Coders and Image Compression Standards

by Joseph, Steffy Maria, Sathidevi, P. S.
Published in Circuits, systems, and signal processing (01.08.2023)

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Using Python Modules in Real-Time Plasma Systems for Fusion

by Ferron, Nicolo, Manduchi, Gabriele
Published in Sensors (Basel, Switzerland) (10.09.2022)

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gmxapi: A GROMACS-native Python interface for molecular dynamics with ensemble and plugin support

by Irrgang, M. Eric, Davis, Caroline, Kasson, Peter M.
Published in PLoS computational biology (01.02.2022)

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