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pyKVFinder: an efficient and integrable Python package for biomolecular cavity detection and characterization in data science
Guerra, João Victor da Silva, Ribeiro-Filho, Helder Veras, Jara, Gabriel Ernesto, Bortot, Leandro Oliveira, Pereira, José Geraldo de Carvalho, Lopes-de-Oliveira, Paulo Sérgio
Published in BMC bioinformatics (20.12.2021)
Published in BMC bioinformatics (20.12.2021)
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Journal Article
Comparison and Applications of Multiplying 2 by 2 Matrices Using Strassen Algorithm in Python IDLE, Jupyter Notebook, and Colab
Gao, Shanzhen, Gao, Weizheng, Malomo, Olumide, Allagan, Julian D., Eyob, Ephrem, Su, Jianning
Published in 2023 Congress in Computer Science, Computer Engineering, & Applied Computing (CSCE) (24.07.2023)
Published in 2023 Congress in Computer Science, Computer Engineering, & Applied Computing (CSCE) (24.07.2023)
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Conference Proceeding
MetPy: A Meteorological Python Library for Data Analysis and Visualization
May, Ryan M., Goebbert, Kevin H., Thielen, Jonathan E., Leeman, John R., Camron, M. Drew, Bruick, Zachary, Bruning, Eric C., Manser, Russell P., Arms, Sean C., Marsh, Patrick T.
Published in Bulletin of the American Meteorological Society (01.10.2022)
Published in Bulletin of the American Meteorological Society (01.10.2022)
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Journal Article
PyAGH: a python package to fast construct kinship matrices based on different levels of omic data
Zhao, Wei, Qadri, Qamar Raza, Zhang, Zhenyang, Wang, Zhen, Pan, Yuchun, Wang, Qishan, Zhang, Zhe
Published in BMC bioinformatics (18.04.2023)
Published in BMC bioinformatics (18.04.2023)
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Journal Article
Hard SyDR: A Benchmarking Environment for Global Navigation Satellite System Algorithms
Grenier, Antoine, Lei, Jie, Damsgaard, Hans Jakob, Quintana-Ortí, Enrique S., Ometov, Aleksandr, Lohan, Elena Simona, Nurmi, Jari
Published in Sensors (Basel, Switzerland) (01.01.2024)
Published in Sensors (Basel, Switzerland) (01.01.2024)
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Journal Article
Python: An Ecosystem for Scientific Computing
Perez, Fernando, Granger, Brian E., Hunter, John D.
Published in Computing in science & engineering (01.03.2011)
Published in Computing in science & engineering (01.03.2011)
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Journal Article
gmxapi: A GROMACS-native Python interface for molecular dynamics with ensemble and plugin support
Irrgang, M. Eric, Davis, Caroline, Kasson, Peter M.
Published in PLoS computational biology (01.02.2022)
Published in PLoS computational biology (01.02.2022)
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Journal Article
Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette A. I., Tsang, Ashley P., Mitchell, Jacob T., Zhou, David L., Bowden, Julia, Davis-Marcisak, Emily, Sherman, Thomas, Liefeld, Ted, Loth, Melanie, Goff, Loyal A., Zimmerman, Jacquelyn W., Kinny-Köster, Ben, Jaffee, Elizabeth M., Tamayo, Pablo, Mesirov, Jill P., Reich, Michael, Fertig, Elana J., Stein-O’Brien, Genevieve L.
Published in Nature protocols (01.12.2023)
Published in Nature protocols (01.12.2023)
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Journal Article
New Python-based methods for data processing
Sauter, Nicholas K., Hattne, Johan, Grosse-Kunstleve, Ralf W., Echols, Nathaniel
Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
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Journal Article
PEPMatch: a tool to identify short peptide sequence matches in large sets of proteins
Marrama, Daniel, Chronister, William D., Westernberg, Luise, Vita, Randi, Koşaloğlu-Yalçın, Zeynep, Sette, Alessandro, Nielsen, Morten, Greenbaum, Jason A., Peters, Bjoern
Published in BMC bioinformatics (18.12.2023)
Published in BMC bioinformatics (18.12.2023)
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Journal Article