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    Efficiently accelerated bioimage analysis with NanoPyx, a Liquid Engine-powered Python framework
                                      
                                            Saraiva, Bruno M.,                              Cunha, Inês,                              Brito, António D.,                              Follain, Gautier,                              Portela, Raquel,                              Haase, Robert,                              Pereira, Pedro M.,                              Jacquemet, Guillaume,                              Henriques, Ricardo                              
Published in Nature methods (01.02.2025)
                   
      
      
                                                  Published in Nature methods (01.02.2025)
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          GPU-accelerated real-time reconstruction in Python of three-dimensional datasets from structured illumination microscopy with hexagonal patterns
                                      
                                            Gong, Hai,                              Guo, Wenjun,                              Neil, Mark A. A.                              
Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (14.06.2021)
                   
      
      
                                                  Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (14.06.2021)
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          Diffusional Kurtosis Imaging in the Diffusion Imaging in Python Project
                                      
                                            Henriques, Rafael Neto,                              Correia, Marta M.,                              Marrale, Maurizio,                              Huber, Elizabeth,                              Kruper, John,                              Koudoro, Serge,                              Yeatman, Jason D.,                              Garyfallidis, Eleftherios,                              Rokem, Ariel                              
Published in Frontiers in human neuroscience (19.07.2021)
                   
      
      
                                                  Published in Frontiers in human neuroscience (19.07.2021)
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          The Quantification of Myocardial Fibrosis on Human Histopathology Images by a Semi-Automatic Algorithm
                                      
                                            Gonciar, Diana,                              Berciu, Alexandru-George,                              Danku, Alex Ede,                              Lorenzovici, Noemi,                              Dulf, Eva-Henrietta,                              Mocan, Teodora,                              Nicula, Sorina-Melinda,                              Agoston-Coldea, Lucia                              
Published in Applied sciences (01.09.2024)
                   
      
      
                                                  Published in Applied sciences (01.09.2024)
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          MetPy: A Meteorological Python Library for Data Analysis and Visualization
                                      
                                            May, Ryan M.,                              Goebbert, Kevin H.,                              Thielen, Jonathan E.,                              Leeman, John R.,                              Camron, M. Drew,                              Bruick, Zachary,                              Bruning, Eric C.,                              Manser, Russell P.,                              Arms, Sean C.,                              Marsh, Patrick T.                              
Published in Bulletin of the American Meteorological Society (01.10.2022)
                   
      
      
                                                  Published in Bulletin of the American Meteorological Society (01.10.2022)
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          Application of multiple machine learning algorithms for intelligent prediction of the strength of fine-grained natural soils
                                      
                                            Khalid, Muhammad Shahroz,                              Rehman, Zia ur,                              Alshameri, Badee,                              Maqsood, Zain,                              Hussain, Fazal,                              Khalid, Muhammad Irslan,                              Arbi, Syed Jamal,                              Haider, Abbas                              
Published in Arabian journal of geosciences (01.05.2025)
                   
      
      
                                                  Published in Arabian journal of geosciences (01.05.2025)
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          Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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          MR. Estimator, a toolbox to determine intrinsic timescales from subsampled spiking activity
                                      
                                            Spitzner, F. P.,                              Dehning, J.,                              Wilting, J.,                              Hagemann, A.,                              P. Neto, J.,                              Zierenberg, J.,                              Priesemann, V.                              
Published in PloS one (29.04.2021)
                   
      
      
                                                  Published in PloS one (29.04.2021)
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          Upconversion-based hydrogel kit with Python-assisted analysis platform for sample-to-result detection of organophosphorus pesticide
                                      
                                            Kong, Minghui,                              Lu, Yang,                              Ma, Yuan,                              Zhao, Xu,                              Wu, Jiahang,                              Lu, Geyu,                              Yan, Xu,                              Liu, Xiaomin                              
Published in Journal of colloid and interface science (15.09.2024)
                   
      
      
                                                  Published in Journal of colloid and interface science (15.09.2024)
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          Python: An Ecosystem for Scientific Computing
                                      
                                            Perez, Fernando,                              Granger, Brian E.,                              Hunter, John D.                              
Published in Computing in science & engineering (01.03.2011)
                   
      
      
                                                  Published in Computing in science & engineering (01.03.2011)
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          PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
                                      
                                            Singh, Gursimran,                              Chharia, Aviral,                              Upadhyay, Rahul,                              Kumar, Vinay,                              Longo, Luca                              
Published in PloS one (06.08.2025)
                   
      
      
                                                  Published in PloS one (06.08.2025)
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          An algorithm for automated extraction of resonance parameters from the stabilization method
                                      
                                            Langner, Johanna,                              Sadhukhan, Anjan,                              Saha, Jayanta K.,                              Witek, Henryk A.                              
Published in Computer physics communications (01.11.2025)
                   
      
      
                                                  Published in Computer physics communications (01.11.2025)
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          Development and evaluation of a computerized algorithm for the interpretation of pulmonary function tests
                                      
                                            Huang, Yuh-Chin T.,                              Henriquez, Luke,                              Chen, Hengji,                              Henriquez, Craig                              
Published in PloS one (29.01.2024)
                   
      
      
                                                  Published in PloS one (29.01.2024)
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