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    Portable BLAST-like algorithm library and its implementations for command line, Python, and R
                                      
                                            Schmid, Steven,                              Jeevannavar, Aditya,                              Julian, Timothy R.,                              Tamminen, Manu                              
Published in PloS one (30.11.2023)
                   
      
      
                                                  Published in PloS one (30.11.2023)
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              Journal Article
          
              
          Innovative UAV LiDAR Generated Point-Cloud Processing Algorithm in Python for Unsupervised Detection and Analysis of Agricultural Field-Plots
                                      
                                            Polák, Michal,                              Miřijovský, Jakub,                              Hernándiz, Alba E.,                              Špíšek, Zdeněk,                              Koprna, Radoslav,                              Humplík, Jan F.                              
Published in Remote sensing (Basel, Switzerland) (10.08.2021)
                   
      
      
                                                  Published in Remote sensing (Basel, Switzerland) (10.08.2021)
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          Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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          Python algorithm package for automated Estimation of major legume root traits using two dimensional images
                                      
                                            Ghimire, Amit,                              Chung, Yong Suk,                              Jeong, Sungmoon,                              Kim, Yoonha                              
Published in Scientific reports (01.03.2025)
                   
      
      
                                                  Published in Scientific reports (01.03.2025)
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          GPU-accelerated real-time reconstruction in Python of three-dimensional datasets from structured illumination microscopy with hexagonal patterns
                                      
                                            Gong, Hai,                              Guo, Wenjun,                              Neil, Mark A. A.                              
Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (14.06.2021)
                   
      
      
                                                  Published in Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences (14.06.2021)
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          A Python Algorithm to Analyze Inelastic Neutron Scattering Spectra Based on the y‑Scale Formalism
                                      
                                            Scatigno, Claudia,                              Romanelli, Giovanni,                              Preziosi, Enrico,                              Zanetti, Matteo,                              Parker, Stewart F,                              Rudić, Svemir,                              Andreani, Carla,                              Senesi, Roberto                              
Published in Journal of chemical theory and computation (08.12.2020)
                   
      
      
                                                  Published in Journal of chemical theory and computation (08.12.2020)
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