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    Biotite: new tools for a versatile Python bioinformatics library
                                      
                                            Kunzmann, Patrick,                              Müller, Tom David,                              Greil, Maximilian,                              Krumbach, Jan Hendrik,                              Anter, Jacob Marcel,                              Bauer, Daniel,                              Islam, Faisal,                              Hamacher, Kay                              
Published in BMC bioinformatics (05.06.2023)
                   
      
      
                                                  Published in BMC bioinformatics (05.06.2023)
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              Journal Article
          
              
          PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
                                      
                                            Singh, Gursimran,                              Chharia, Aviral,                              Upadhyay, Rahul,                              Kumar, Vinay,                              Longo, Luca                              
Published in PloS one (06.08.2025)
                   
      
      
                                                  Published in PloS one (06.08.2025)
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              Journal Article
          
              
          RABiTPy: an open-source Python software for rapid, AI-powered bacterial tracking and analysis
                                      
                                            Sen, Samyabrata,                              Vairagare, Indraneel,                              Gosai, Jitendrapuri,                              Shrivastava, Abhishek                              
Published in BMC bioinformatics (18.05.2025)
                   
      
      
                                                  Published in BMC bioinformatics (18.05.2025)
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              Journal Article
          
              
          PyUNIxMD: A Python‐based excited state molecular dynamics package
                                      
                                            Lee, In Seong,                              Ha, Jong‐Kwon,                              Han, Daeho,                              Kim, Tae In,                              Moon, Sung Wook,                              Min, Seung Kyu                              
Published in Journal of computational chemistry (15.09.2021)
                   
      
      
                                                  Published in Journal of computational chemistry (15.09.2021)
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              Journal Article
          
              
          Bioinformatic pipelines in Python with Leaf
                                      
                                            Napolitano, Francesco,                              Mariani-Costantini, Renato,                              Tagliaferri, Roberto                              
Published in BMC bioinformatics (21.06.2013)
                   
      
      
                                                  Published in BMC bioinformatics (21.06.2013)
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              Journal Article
          
              
          Correct orchestration of federated learning generic algorithms: Python translation to CSP and verification by PAT
                                      
                                            Djukic, Miodrag,                              Prokić, Ivan,                              Popovic, Miroslav,                              Ghilezan, Silvia,                              Popovic, Marko,                              Prokić, Simona                              
Published in International journal on software tools for technology transfer (01.02.2025)
                   
      
      
                                                  Published in International journal on software tools for technology transfer (01.02.2025)
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              Journal Article
          
              
          COBRApy: COnstraints-Based Reconstruction and Analysis for Python
                                      
                                            Ebrahim, Ali,                              Lerman, Joshua A,                              Palsson, Bernhard O,                              Hyduke, Daniel R                              
Published in BMC systems biology (08.08.2013)
                   
      
      
                                                  Published in BMC systems biology (08.08.2013)
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              Journal Article
          
              
          Legate Sparse: Distributed Sparse Computing in Python
                                      
                                            Yadav, Rohan,                              Lee, Wonchan,                              Elibol, Melih,                              Patti, Taylor Lee,                              Papadakis, Manolis,                              Garland, Michael,                              Aiken, Alex,                              Kjolstad, Fredrik,                              Bauer, Michael                              
Published in International Conference for High Performance Computing, Networking, Storage and Analysis (Online) (11.11.2023)
                   
      
      
                                                  Published in International Conference for High Performance Computing, Networking, Storage and Analysis (Online) (11.11.2023)
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              Conference Proceeding
          
              
          SPOTting Model Parameters Using a Ready-Made Python Package
                                      
                                            Houska, Tobias,                              Kraft, Philipp,                              Chamorro-Chavez, Alejandro,                              Breuer, Lutz                              
Published in PloS one (17.12.2015)
                   
      
      
                                                  Published in PloS one (17.12.2015)
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              Journal Article
          
              
          PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
                                      
                                            Georgi, Benjamin,                              Costa, Ivan Gesteira,                              Schliep, Alexander                              
Published in BMC bioinformatics (06.01.2010)
                   
      
      
                                                  Published in BMC bioinformatics (06.01.2010)
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              Journal Article