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    Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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              Journal Article
          
              
          Biotite: new tools for a versatile Python bioinformatics library
                                      
                                            Kunzmann, Patrick,                              Müller, Tom David,                              Greil, Maximilian,                              Krumbach, Jan Hendrik,                              Anter, Jacob Marcel,                              Bauer, Daniel,                              Islam, Faisal,                              Hamacher, Kay                              
Published in BMC bioinformatics (05.06.2023)
                   
      
      
                                                  Published in BMC bioinformatics (05.06.2023)
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              Journal Article
          
              
          RABiTPy: an open-source Python software for rapid, AI-powered bacterial tracking and analysis
                                      
                                            Sen, Samyabrata,                              Vairagare, Indraneel,                              Gosai, Jitendrapuri,                              Shrivastava, Abhishek                              
Published in BMC bioinformatics (18.05.2025)
                   
      
      
                                                  Published in BMC bioinformatics (18.05.2025)
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          Portable beef-freshness detection platform based on colorimetric sensor array technology and bionic algorithms for total volatile basic nitrogen (TVB-N) determination
                                      
                                            Xu, Weidong,                              He, Yingchao,                              Li, Jiaheng,                              Zhou, Jianwei,                              Xu, Enbo,                              Wang, Wenjun,                              Liu, Donghong                              
Published in Food control (01.08.2023)
                   
      
      
                                                  Published in Food control (01.08.2023)
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              Journal Article
          
              
          PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
                                      
                                            Georgi, Benjamin,                              Costa, Ivan Gesteira,                              Schliep, Alexander                              
Published in BMC bioinformatics (06.01.2010)
                   
      
      
                                                  Published in BMC bioinformatics (06.01.2010)
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              Journal Article
          
              
          Mugen-UMAP: UMAP visualization and clustering of mutated genes in single-cell DNA sequencing data
                                      
                                            Li, Teng,                              Zou, Yiran,                              Li, Xianghan,                              Wong, Thomas K. F.,                              Rodrigo, Allen G.                              
Published in BMC bioinformatics (27.09.2024)
                   
      
      
                                                  Published in BMC bioinformatics (27.09.2024)
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          Bioinformatic pipelines in Python with Leaf
                                      
                                            Napolitano, Francesco,                              Mariani-Costantini, Renato,                              Tagliaferri, Roberto                              
Published in BMC bioinformatics (21.06.2013)
                   
      
      
                                                  Published in BMC bioinformatics (21.06.2013)
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              Journal Article
          
              
          SciPy 1.0: fundamental algorithms for scientific computing in Python
                                      
                                            Virtanen, Pauli,                              Gommers, Ralf,                              Oliphant, Travis E.,                              Haberland, Matt,                              Reddy, Tyler,                              Cournapeau, David,                              Burovski, Evgeni,                              Peterson, Pearu,                              Weckesser, Warren,                              Bright, Jonathan,                              van der Walt, Stéfan J.,                              Brett, Matthew,                              Wilson, Joshua,                              Millman, K. Jarrod,                              Mayorov, Nikolay,                              Nelson, Andrew R. J.,                              Jones, Eric,                              Kern, Robert,                              Larson, Eric,                              Carey, C J,                              Polat, İlhan,                              Feng, Yu,                              Moore, Eric W.,                              VanderPlas, Jake,                              Laxalde, Denis,                              Perktold, Josef,                              Cimrman, Robert,                              Henriksen, Ian,                              Quintero, E. A.,                              Harris, Charles R.,                              Archibald, Anne M.,                              Ribeiro, Antônio H.,                              Pedregosa, Fabian,                              van Mulbregt, Paul                              
Published in Nature methods (01.03.2020)
                   
      
      
                                                  Published in Nature methods (01.03.2020)
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          OMD Curation Toolkit: a workflow for in-house curation of public omics datasets
                                      
                                            Piquer-Esteban, Samuel,                              Arnau, Vicente,                              Diaz, Wladimiro,                              Moya, Andrés                              
Published in BMC bioinformatics (09.05.2024)
                   
      
      
                                                  Published in BMC bioinformatics (09.05.2024)
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          Method of Multi-agent Path Planning for Lunar Robots Swarm Based on Improved CBS Algorithm
                                      
                                            Feng, Haolong,                              Wu, Songtai,                              Liu, Shengyang,                              Song, Ting,                              Han, Fei                              
Published in Chinese Control Conference (28.07.2024)
                   
      
      
                                                  Published in Chinese Control Conference (28.07.2024)
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              Conference Proceeding
          
              
          Path Planning Methods for Four-Way Shuttles in Dynamic Environments Based on A and CBS Algorithms
                                      
                                            Lu, Jiansha,                              Jin, Qihao,                              Yuan, Jun,                              Ma, Jianping,                              Qi, Jin,                              Shao, Yiping                              
Published in Mathematics (Basel) (01.05.2025)
                   
      
      
                                                  Published in Mathematics (Basel) (01.05.2025)
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          Revisiting smart antenna array design with multiple interferers using basic adaptive beamforming algorithms: Comparative performance study with testbed results
                                      
                                            Imtiaj, SK,                              Misra, Iti Saha,                              Bhattacharya, Sandipan                              
Published in Engineering reports (Hoboken, N.J.) (01.01.2021)
                   
      
      
                                                  Published in Engineering reports (Hoboken, N.J.) (01.01.2021)
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              Journal Article