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    Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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              Journal Article
          
              
          SPOTting Model Parameters Using a Ready-Made Python Package
                                      
                                            Houska, Tobias,                              Kraft, Philipp,                              Chamorro-Chavez, Alejandro,                              Breuer, Lutz                              
Published in PloS one (17.12.2015)
                   
      
      
                                                  Published in PloS one (17.12.2015)
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              Journal Article
          
              
          Domain Knowledge Matters: Improving Prompts with Fix Templates for Repairing Python Type Errors
                                      
                                            Peng, Yun,                              Gao, Shuzheng,                              Gao, Cuiyun,                              Huo, Yintong,                              Lyu, Michael R.                              
Published in Proceedings / International Conference on Software Engineering (14.04.2024)
                   
      
      
                                                  Published in Proceedings / International Conference on Software Engineering (14.04.2024)
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              Conference Proceeding
          
              
          String representation of trivalent 2-stratifolds with trivial fundamental group
                                      
                                            Hernández-Ketchul, Myriam,                              Rodríguez-Viorato, Jesús                              
Published in Boletín de la Sociedad Matemática Mexicana (01.03.2023)
                   
      
      
                                                  Published in Boletín de la Sociedad Matemática Mexicana (01.03.2023)
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              Journal Article