by Alipanahi, Babak, Delong, Andrew, Weirauch, Matthew T, Frey, Brendan J
Published in Nature biotechnology (01.08.2015)

by Petrany, Michael J., Swoboda, Casey O., Sun, Chengyi, Chetal, Kashish, Chen, Xiaoting, Weirauch, Matthew T., Salomonis, Nathan, Millay, Douglas P.
Published in Nature communications (11.12.2020)

by Weirauch, Matthew T., Yang, Ally, Albu, Mihai, Cote, Atina G., Montenegro-Montero, Alejandro, Drewe, Philipp, Najafabadi, Hamed S., Lambert, Samuel A., Mann, Ishminder, Cook, Kate, Zheng, Hong, Goity, Alejandra, van Bakel, Harm, Lozano, Jean-Claude, Galli, Mary, Lewsey, Mathew G., Huang, Eryong, Mukherjee, Tuhin, Chen, Xiaoting, Reece-Hoyes, John S., Govindarajan, Sridhar, Shaulsky, Gad, Walhout, Albertha J.M., Bouget, François-Yves, Ratsch, Gunnar, Larrondo, Luis F., Ecker, Joseph R., Hughes, Timothy R.
Published in Cell (11.09.2014)

by Pestle, William J., Crowley, Brooke E., Weirauch, Matthew T.
Published in PloS one (25.07.2014)

by Moreno-Fernandez, Maria E., Giles, Daniel A., Oates, Jarren R., Chan, Calvin C., Damen, Michelle S.M.A., Doll, Jessica R., Stankiewicz, Traci E., Chen, Xiaoting, Chetal, Kashish, Karns, Rebekah, Weirauch, Matthew T., Romick-Rosendale, Lindsey, Xanthakos, Stavra A., Sheridan, Rachel, Szabo, Sara, Shah, Amy S., Helmrath, Michael A., Inge, Thomas H., Deshmukh, Hitesh, Salomonis, Nathan, Divanovic, Senad
Published in Cell metabolism (01.06.2021)

by Najafabadi, Hamed S, Mnaimneh, Sanie, Schmitges, Frank W, Garton, Michael, Lam, Kathy N, Yang, Ally, Albu, Mihai, Weirauch, Matthew T, Radovani, Ernest, Kim, Philip M, Greenblatt, Jack, Frey, Brendan J, Hughes, Timothy R
Published in Nature biotechnology (01.05.2015)

by Korinfskaya, Svetlana, Parameswaran, Sreeja, Weirauch, Matthew T., Barski, Artem
Published in Frontiers in immunology (06.08.2021)

by Fu, Hailu, Zheng, Haizi, Chen, Xiaoting, Weirauch, Matthew T., Muglia, Louis J., Wang, Li, Liu, Yaping
Published in Genome Biology (16.03.2023)

by Hass, Matthew R., Brissette, Daniel, Parameswaran, Sreeja, Pujato, Mario, Donmez, Omer, Kottyan, Leah C., Weirauch, Matthew T., Kopan, Raphael
Published in PLoS genetics (10.06.2021)

by Maezawa, So, Sakashita, Akihiko, Yukawa, Masashi, Chen, Xiaoting, Takahashi, Kazuki, Alavattam, Kris G., Nakata, Ippo, Weirauch, Matthew T., Barski, Artem, Namekawa, Satoshi H.
Published in Nature structural & molecular biology (01.10.2020)

by Sullivan, Alessandra M., Arsovski, Andrej A., Lempe, Janne, Bubb, Kerry L., Weirauch, Matthew T., Sabo, Peter J., Sandstrom, Richard, Thurman, Robert E., Neph, Shane, Reynolds, Alex P., Stergachis, Andrew B., Vernot, Benjamin, Johnson, Audra K., Haugen, Eric, Sullivan, Shawn T., Thompson, Agnieszka, Neri, Fidencio V., Weaver, Molly, Diegel, Morgan, Mnaimneh, Sanie, Yang, Ally, Hughes, Timothy R., Nemhauser, Jennifer L., Queitsch, Christine, Stamatoyannopoulos, John A.
Published in Cell reports (Cambridge) (25.09.2014)

by Hou, Guojun, Harley, Isaac T. W., Lu, Xiaoming, Zhou, Tian, Xu, Ning, Yao, Chao, Qin, Yuting, Ouyang, Ye, Ma, Jianyang, Zhu, Xinyi, Yu, Xiang, Xu, Hong, Dai, Dai, Ding, Huihua, Yin, Zhihua, Ye, Zhizhong, Deng, Jun, Zhou, Mi, Tang, Yuanjia, Namjou, Bahram, Guo, Ya, Weirauch, Matthew T., Kottyan, Leah C., Harley, John B., Shen, Nan
Published in Nature communications (08.01.2021)

by Vander Lugt, Bryan, Riddell, Jeremy, Khan, Aly A., Hackney, Jason A., Lesch, Justin, DeVoss, Jason, Weirauch, Matthew T., Singh, Harinder, Mellman, Ira
Published in The Journal of cell biology (06.03.2017)

by Mao, Ai-Ping, Constantinides, Michael G., Mathew, Rebecca, Zuo, Zhixiang, Chen, Xiaoting, Weirauch, Matthew T., Bendelac, Albert
Published in Proceedings of the National Academy of Sciences - PNAS (05.07.2016)

by Sun, Chengyi, Swoboda, Casey O., Morales, Fabian Montecino, Calvo, Cristofer, Petrany, Michael J., Parameswaran, Sreeja, VonHandorf, Andrew, Weirauch, Matthew T., Lepper, Christoph, Millay, Douglas P.
Published in Nature communications (30.10.2024)

by Cazares, Tareian A., Rizvi, Faiz W., Iyer, Balaji, Chen, Xiaoting, Kotliar, Michael, Bejjani, Anthony T., Wayman, Joseph A., Donmez, Omer, Wronowski, Benjamin, Parameswaran, Sreeja, Kottyan, Leah C., Barski, Artem, Weirauch, Matthew T., Prasath, V. B. Surya, Miraldi, Emily R.
Published in PLoS computational biology (01.01.2023)

by Lu, Xiaoming, Chen, Xiaoting, Forney, Carmy, Donmez, Omer, Miller, Daniel, Parameswaran, Sreeja, Hong, Ted, Huang, Yongbo, Pujato, Mario, Cazares, Tareian, Miraldi, Emily R., Ray, John P., de Boer, Carl G., Harley, John B., Weirauch, Matthew T., Kottyan, Leah C.
Published in Nature communications (12.03.2021)

by Gu, Zirong, Kalamboglas, John, Yoshioka, Shin, Han, Wenqi, Li, Zhuo, Kawasawa, Yuka Imamura, Pochareddy, Sirisha, Li, Zhen, Liu, Fuchen, Xu, Xuming, Wijeratne, Sagara, Ueno, Masaki, Blatz, Emily, Salomone, Joseph, Kumanogoh, Atsushi, Rasin, Mladen-Roko, Gebelein, Brian, Weirauch, Matthew T., Sestan, Nenad, Martin, John H., Yoshida, Yutaka
Published in Science (American Association for the Advancement of Science) (28.07.2017)

by Pan, Wen, Zhu, Shu, Dai, Dai, Liu, Zheng, Li, Dan, Li, Bin, Gagliani, Nicola, Zheng, Yunjiang, Tang, Yuanjia, Weirauch, Matthew T., Chen, Xiaoting, Zhu, Wei, Wang, Yue, Chen, Bo, Qian, Youcun, Chen, Yingxuan, Fang, Jingyuan, Herbst, Ronald, Richman, Laura, Jallal, Bahija, Harley, John B., Flavell, Richard A., Yao, Yihong, Shen, Nan
Published in Nature communications (12.05.2015)

by Chan, Calvin C., Damen, Michelle S. M. A., Moreno-Fernandez, Maria E., Stankiewicz, Traci E., Cappelletti, Monica, Alarcon, Pablo C., Oates, Jarren R., Doll, Jessica R., Mukherjee, Rajib, Chen, Xiaoting, Karns, Rebekah, Weirauch, Matthew T., Helmrath, Michael A., Inge, Thomas H., Divanovic, Senad
Published in Nature communications (02.06.2020)