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Microbial strain-level population structure and genetic diversity from metagenomes
Truong, Duy Tin, Tett, Adrian, Pasolli, Edoardo, Huttenhower, Curtis, Segata, Nicola
Published in Genome research (01.04.2017)
Published in Genome research (01.04.2017)
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Journal Article
Age-related changes in gut microbiota composition from newborn to centenarian: a cross-sectional study
Odamaki, Toshitaka, Kato, Kumiko, Sugahara, Hirosuke, Hashikura, Nanami, Takahashi, Sachiko, Xiao, Jin-zhong, Abe, Fumiaki, Osawa, Ro
Published in BMC microbiology (25.05.2016)
Published in BMC microbiology (25.05.2016)
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Journal Article
High-Throughput Mapping of B Cell Receptor Sequences to Antigen Specificity
Setliff, Ian, Shiakolas, Andrea R., Pilewski, Kelsey A., Murji, Amyn A., Mapengo, Rutendo E., Janowska, Katarzyna, Richardson, Simone, Oosthuysen, Charissa, Raju, Nagarajan, Ronsard, Larance, Kanekiyo, Masaru, Qin, Juliana S., Kramer, Kevin J., Greenplate, Allison R., McDonnell, Wyatt J., Graham, Barney S., Connors, Mark, Lingwood, Daniel, Acharya, Priyamvada, Morris, Lynn, Georgiev, Ivelin S.
Published in Cell (12.12.2019)
Published in Cell (12.12.2019)
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Journal Article
Temporal variability in quantitative human gut microbiome profiles and implications for clinical research
Vandeputte, Doris, De Commer, Lindsey, Tito, Raul Y., Kathagen, Gunter, Sabino, João, Vermeire, Séverine, Faust, Karoline, Raes, Jeroen
Published in Nature communications (18.11.2021)
Published in Nature communications (18.11.2021)
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Journal Article
Plasma DNA tissue mapping by genome-wide methylation sequencing for noninvasive prenatal, cancer, and transplantation assessments
Sun, Kun, Jiang, Peiyong, Chan, K. C. Allen, Wong, John, Cheng, Yvonne K. Y., Liang, Raymond H. S., Chan, Wai-kong, Ma, Edmond S. K., Chan, Stephen L., Cheng, Suk Hang, Chan, Rebecca W. Y., Tong, Yu K., Ng, Simon S. M., Wong, Raymond S. M., Hui, David S. C., Leung, Tse Ngong, Leung, Tak Y., Lai, Paul B. S., Chiu, Rossa W. K., Lo, Yuk Ming Dennis
Published in Proceedings of the National Academy of Sciences - PNAS (06.10.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (06.10.2015)
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Journal Article
A Model for Genome-First Care: Returning Secondary Genomic Findings to Participants and Their Healthcare Providers in a Large Research Cohort
Schwartz, Marci L.B., McCormick, Cara Zayac, Lazzeri, Amanda L., Lindbuchler, D’Andra M., Hallquist, Miranda L.G., Manickam, Kandamurugu, Buchanan, Adam H., Rahm, Alanna Kulchak, Giovanni, Monica A., Frisbie, Lauren, Flansburg, Carroll N., Davis, F. Daniel, Sturm, Amy C., Nicastro, Christine, Lebo, Matthew S., Mason-Suares, Heather, Mahanta, Lisa Marie, Carey, David J., Williams, Janet L., Williams, Marc S., Ledbetter, David H., Faucett, W. Andrew, Murray, Michael F.
Published in American journal of human genetics (06.09.2018)
Published in American journal of human genetics (06.09.2018)
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Journal Article
Truncations of Titin Causing Dilated Cardiomyopathy
Herman, Daniel S, Lam, Lien, Taylor, Matthew R.G, Wang, Libin, Teekakirikul, Polakit, Christodoulou, Danos, Conner, Lauren, DePalma, Steven R, McDonough, Barbara, Sparks, Elizabeth, Teodorescu, Debbie Lin, Cirino, Allison L, Banner, Nicholas R, Pennell, Dudley J, Graw, Sharon, Merlo, Marco, Di Lenarda, Andrea, Sinagra, Gianfranco, Bos, J. Martijn, Ackerman, Michael J, Mitchell, Richard N, Murry, Charles E, Lakdawala, Neal K, Ho, Carolyn Y, Barton, Paul J.R, Cook, Stuart A, Mestroni, Luisa, Seidman, Christine E, Seidman, J.G
Published in The New England journal of medicine (16.02.2012)
Published in The New England journal of medicine (16.02.2012)
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Journal Article
Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome
Goltsman, Daniela S. Aliaga, Sun, Christine L., Proctor, Diana M., DiGiulio, Daniel B., Robaczewska, Anna, Thomas, Brian C., Shaw, Gary M., Stevenson, David K., Holmes, Susan P., Banfield, Jillian F., Relman, David A.
Published in Genome research (01.10.2018)
Published in Genome research (01.10.2018)
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Journal Article
Systematic analysis of the gerontome reveals links between aging and age-related diseases
Fernandes, Maria, Wan, Cen, Tacutu, Robi, Barardo, Diogo, Rajput, Ashish, Wang, Jingwei, Thoppil, Harikrishnan, Thornton, Daniel, Yang, Chenhao, Freitas, Alex, de Magalhães, João Pedro
Published in Human molecular genetics (01.11.2016)
Published in Human molecular genetics (01.11.2016)
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Journal Article
Comparison of the gut microbiota composition between obese and non-obese individuals in a Japanese population, as analyzed by terminal restriction fragment length polymorphism and next-generation sequencing
Kasai, Chika, Sugimoto, Kazushi, Moritani, Isao, Tanaka, Junichiro, Oya, Yumi, Inoue, Hidekazu, Tameda, Masahiko, Shiraki, Katsuya, Ito, Masaaki, Takei, Yoshiyuki, Takase, Kojiro
Published in BMC gastroenterology (11.08.2015)
Published in BMC gastroenterology (11.08.2015)
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Journal Article
Nephele: a cloud platform for simplified, standardized and reproducible microbiome data analysis
Weber, Nick, Liou, David, Dommer, Jennifer, MacMenamin, Philip, Quiñones, Mariam, Misner, Ian, Oler, Andrew J, Wan, Joe, Kim, Lewis, Coakley McCarthy, Meghan, Ezeji, Samuel, Noble, Karlynn, Hurt, Darrell E
Published in Bioinformatics (15.04.2018)
Published in Bioinformatics (15.04.2018)
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Journal Article
Signatures of Archaic Adaptive Introgression in Present-Day Human Populations
Racimo, Fernando, Marnetto, Davide, Huerta-Sánchez, Emilia
Published in Molecular biology and evolution (01.02.2017)
Published in Molecular biology and evolution (01.02.2017)
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Journal Article
Full‐length transcriptome sequences and splice variants obtained by a combination of sequencing platforms applied to different root tissues of Salvia miltiorrhiza and tanshinone biosynthesis
Xu, Zhichao, Peters, Reuben J., Weirather, Jason, Luo, Hongmei, Liao, Baosheng, Zhang, Xin, Zhu, Yingjie, Ji, Aijia, Zhang, Bing, Hu, Songnian, Au, Kin Fai, Song, Jingyuan, Chen, Shilin
Published in The Plant journal : for cell and molecular biology (01.06.2015)
Published in The Plant journal : for cell and molecular biology (01.06.2015)
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Journal Article
Pyrosequencing study of fecal microflora of autistic and control children
Finegold, Sydney M., Dowd, Scot E., Gontcharova, Viktoria, Liu, Chengxu, Henley, Kathleen E., Wolcott, Randall D., Youn, Eunseog, Summanen, Paula H., Granpeesheh, Doreen, Dixon, Dennis, Liu, Minghsun, Molitoris, Denise R., Green, John A.
Published in Anaerobe (01.08.2010)
Published in Anaerobe (01.08.2010)
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Journal Article
Graphene as a subnanometre trans-electrode membrane
Garaj, S., Hubbard, W., Reina, A., Kong, J., Branton, D., Golovchenko, J. A.
Published in Nature (London) (09.09.2010)
Published in Nature (London) (09.09.2010)
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Journal Article
Association between Microdeletion and Microduplication at 16p11.2 and Autism
Weiss, Lauren A, Shen, Yiping, Korn, Joshua M, Arking, Dan E, Miller, David T, Fossdal, Ragnheidur, Saemundsen, Evald, Stefansson, Hreinn, Stefansson, Kari, Ferreira, Manuel A.R, Green, Todd, Platt, Orah S, Ruderfer, Douglas M, Walsh, Christopher A, Altshuler, David, Chakravarti, Aravinda, Tanzi, Rudolph E, Santangelo, Susan L, Gusella, James F, Sklar, Pamela, Wu, Bai-Lin, Daly, Mark J
Published in The New England journal of medicine (14.02.2008)
Published in The New England journal of medicine (14.02.2008)
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Journal Article
Clinical genomics expands the morbid genome of intellectual disability and offers a high diagnostic yield
Anazi, S, Maddirevula, S, Faqeih, E, Alsedairy, H, Alzahrani, F, Shamseldin, H E, Patel, N, Hashem, M, Ibrahim, N, Abdulwahab, F, Ewida, N, Alsaif, H S, Al sharif, H, Alamoudi, W, Kentab, A, Bashiri, F A, Alnaser, M, AlWadei, A H, Alfadhel, M, Eyaid, W, Hashem, A, Al Asmari, A, Saleh, M M, AlSaman, A, Alhasan, K A, Alsughayir, M, Al Shammari, M, Mahmoud, A, Al-Hassnan, Z N, Al-Husain, M, Osama Khalil, R, Abd El.Meguid, N, Masri, A, Ali, R, Ben-Omran, T, El.Fishway, P, Hashish, A, Ercan Sencicek, A, State, M, Alazami, A M, Salih, M A, Altassan, N, Arold, S T, Abouelhoda, M, Wakil, S M, Monies, D, Shaheen, R, Alkuraya, F S
Published in Molecular psychiatry (01.04.2017)
Published in Molecular psychiatry (01.04.2017)
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Journal Article