Vyzkoušejte nový nástroj s podporou AI
Summon Research Assistant
BETA
Liquid biopsy detection of genomic alterations in pediatric brain tumors from cell-free DNA in peripheral blood, CSF, and urine
Pagès, Mélanie, Rotem, Denisse, Gydush, Gregory, Reed, Sarah, Rhoades, Justin, Ha, Gavin, Lo, Christopher, Fleharty, Mark, Duran, Madeleine, Jones, Robert, Becker, Sarah, Haller, Michaela, Sinai, Claire E, Goumnerova, Liliana, Golub, Todd R, Love, J Christopher, Ligon, Keith L, Wright, Karen D, Adalsteinsson, Viktor A, Beroukhim, Rameen, Bandopadhayay, Pratiti
Published in Neuro-oncology (Charlottesville, Va.) (01.08.2022)
Published in Neuro-oncology (Charlottesville, Va.) (01.08.2022)
Get full text
Journal Article
FinaleMe: Predicting DNA methylation by the fragmentation patterns of plasma cell-free DNA
Liu, Yaping, Reed, Sarah C., Lo, Christopher, Choudhury, Atish D., Parsons, Heather A., Stover, Daniel G., Ha, Gavin, Gydush, Gregory, Rhoades, Justin, Rotem, Denisse, Freeman, Samuel, Katz, David W., Bandaru, Ravi, Zheng, Haizi, Fu, Hailu, Adalsteinsson, Viktor A., Kellis, Manolis
Published in Nature communications (30.03.2024)
Published in Nature communications (30.03.2024)
Get full text
Journal Article
Tumor fraction in cell-free DNA as a biomarker in prostate cancer
Choudhury, Atish D., Werner, Lillian, Francini, Edoardo, Wei, Xiao X., Ha, Gavin, Freeman, Samuel S., Rhoades, Justin, Reed, Sarah C., Gydush, Gregory, Rotem, Denisse, Lo, Christopher, Taplin, Mary-Ellen, Harshman, Lauren C., Zhang, Zhenwei, O’Connor, Edward P., Stover, Daniel G., Parsons, Heather A., Getz, Gad, Meyerson, Matthew, Love, J. Christopher, Hahn, William C., Adalsteinsson, Viktor A.
Published in JCI insight (02.11.2018)
Published in JCI insight (02.11.2018)
Get full text
Journal Article
Modeling clonal structure over narrow time frames via circulating tumor DNA in metastatic breast cancer
Weber, Zachary T., Collier, Katharine A., Tallman, David, Forman, Juliet, Shukla, Sachet, Asad, Sarah, Rhoades, Justin, Freeman, Samuel, Parsons, Heather A., Williams, Nicole O., Barroso-Sousa, Romualdo, Stover, Elizabeth H., Mahdi, Haider, Cibulskis, Carrie, Lennon, Niall J., Ha, Gavin, Adalsteinsson, Viktor A., Tolaney, Sara M., Stover, Daniel G.
Published in Genome medicine (20.05.2021)
Published in Genome medicine (20.05.2021)
Get full text
Journal Article
Comparison of whole‐genome and immunoglobulin‐based circulating tumor DNA assays in diffuse large B‐cell lymphoma
Merryman, Reid W., Rhoades, Justin, Xiong, Kan, Redd, Robert A., Antel, Katherine, An, Hyun Hwan, McDonough, Mikaela, Guerrero, Liliana, Crnjac, Andela, Sridhar, Sainetra, Blewett, Timothy, Cheng, Ju, Dahi, Parastoo B., Nieto, Yago, Joyce, Robin M., Chen, Yi‐Bin, Herrera, Alex F., Armand, Philippe, Murakami, Mark, Adalsteinsson, Viktor A.
Published in HemaSphere (01.04.2024)
Published in HemaSphere (01.04.2024)
Get full text
Journal Article
Priming agents transiently reduce the clearance of cell-free DNA to improve liquid biopsies
Martin-Alonso, Carmen, Tabrizi, Shervin, Xiong, Kan, Blewett, Timothy, Sridhar, Sainetra, Crnjac, Andjela, Patel, Sahil, An, Zhenyi, Bekdemir, Ahmet, Shea, Douglas, Wang, Shih-Ting, Rodriguez-Aponte, Sergio, Naranjo, Christopher A., Rhoades, Justin, Kirkpatrick, Jesse D., Fleming, Heather E., Amini, Ava P., Golub, Todd R., Love, J. Christopher, Bhatia, Sangeeta N., Adalsteinsson, Viktor A.
Published in Science (American Association for the Advancement of Science) (19.01.2024)
Published in Science (American Association for the Advancement of Science) (19.01.2024)
Get full text
Journal Article
Abstract 2483: DirectHRD enables sensitive scar-based classification of homologous recombination deficiency (HRD)
Liu, Ruolin, Roberts, Eugenia, Parsons, Heather, Stover, Elizabeth, Choudhury, Atish, Rhoades, Justin, Blewett, Timothy, Yang, David, Liu, Joyce, Mayer, Erica, Adalsteinsson, Viktor
Published in Cancer research (Chicago, Ill.) (21.04.2025)
Published in Cancer research (Chicago, Ill.) (21.04.2025)
Get full text
Journal Article
Association of Cell-Free DNA Tumor Fraction and Somatic Copy Number Alterations With Survival in Metastatic Triple-Negative Breast Cancer
Stover, Daniel G., Parsons, Heather A., Ha, Gavin, Freeman, Samuel S., Barry, William T., Guo, Hao, Choudhury, Atish D., Gydush, Gregory, Reed, Sarah C., Rhoades, Justin, Rotem, Denisse, Hughes, Melissa E., Dillon, Deborah A., Partridge, Ann H., Wagle, Nikhil, Krop, Ian E., Getz, Gad, Golub, Todd R., Love, J. Christopher, Winer, Eric P., Tolaney, Sara M., Lin, Nancy U., Adalsteinsson, Viktor A.
Published in Journal of clinical oncology (20.02.2018)
Published in Journal of clinical oncology (20.02.2018)
Get full text
Journal Article
Abstract 3251: Immediate postoperative minimal residual disease detection with MAESTRO predicts recurrence and survival in head and neck cancer patients
Sim, Edward S., Rhoades, Justin, Xiong, Kan, Walsh, Laurel, Crnjac, Andjela, Blewett, Timothy, Al-Inaya, Yana, Mendel, Julia, Ruiz, Daniel, Efthymiou, Vasileios, Lumaj, Gjystina, Benjamin, William J., Makrigiorgos, G. Mike, Tabrizi, Shervin, Adalsteinsson, Viktor A., Faden, Daniel L.
Published in Cancer research (Chicago, Ill.) (21.04.2025)
Published in Cancer research (Chicago, Ill.) (21.04.2025)
Get full text
Journal Article
Single duplex DNA sequencing with CODEC detects mutations with high sensitivity
Bae, Jin H., Liu, Ruolin, Roberts, Eugenia, Nguyen, Erica, Tabrizi, Shervin, Rhoades, Justin, Blewett, Timothy, Xiong, Kan, Gydush, Gregory, Shea, Douglas, An, Zhenyi, Patel, Sahil, Cheng, Ju, Sridhar, Sainetra, Liu, Mei Hong, Lassen, Emilie, Skytte, Anne-Bine, Grońska-Pęski, Marta, Shoag, Jonathan E., Evrony, Gilad D., Parsons, Heather A., Mayer, Erica L., Makrigiorgos, G. Mike, Golub, Todd R., Adalsteinsson, Viktor A.
Published in Nature genetics (01.05.2023)
Published in Nature genetics (01.05.2023)
Get full text
Journal Article
Association of KMT2C loss-of-function mutations in circulating tumor DNA and prolonged response to the combination of PARPi and PI3Ki
Ke, Shizong, Liu, Ruolin, Blewett, Tim, Rhoades, Justin, Gulhan, Doga, Konstantinopoulos, Panagiotis A., Matulonis, Ursula A., Adalsteinsson, Viktor, Wulf, Gerburg M.
Published in Journal of clinical oncology (01.06.2023)
Published in Journal of clinical oncology (01.06.2023)
Get full text
Journal Article
MAESTRO-Pool Enables Highly Parallel and Specific Mutation-Enrichment Sequencing for Minimal Residual Disease Detection in Cohort Studies
Blewett, Timothy, Rhoades, Justin, Liu, Ruolin, Xiong, Kan, Sridhar, Sainetra, Crnjac, Andjela, Cheng, Ju, Lawless, Aleigha R, Frederick, Dennie T, Flaherty, Keith T, Makrigiorgos, Gerassimos Mike, Adalsteinsson, Viktor A
Published in Clinical chemistry (Baltimore, Md.) (07.02.2024)
Published in Clinical chemistry (Baltimore, Md.) (07.02.2024)
Get full text
Journal Article
Early Postoperative Minimal Residual Disease Detection with MAESTRO Is Associated with Recurrence and Worse Survival in Patients with Head and Neck Cancer
Sim, Edward S., Rhoades, Justin, Xiong, Kan, Walsh, Laurel, Crnjac, Andjela, Blewett, Timothy, Al-Inaya, Yana, Mendel, Julia, Ruiz-Torres, Daniel A., Efthymiou, Vasileios, Lumaj, Gjystina, Benjamin, William J., Makrigiorgos, G. Mike, Tabrizi, Shervin, Adalsteinsson, Viktor A., Faden, Daniel L.
Published in Clinical cancer research (14.08.2025)
Published in Clinical cancer research (14.08.2025)
Get full text
Journal Article
Impact of Higher Cell-Free DNA Yields on Liquid Biopsy Testing in Glioblastoma Patients
Iorgulescu, J Bryan, Blewett, Timothy, Xiong, Kan, Crnjac, Andjela, Liu, Ruolin, Sridhar, Sainetra, Braun, David A, Sellars, MacLean C, Cheng, Ju, Rhoades, Justin, Reardon, David A, Makrigiorgos, G Mike, Wu, Catherine J, Adalsteinsson, Viktor A
Published in Clinical chemistry (Baltimore, Md.) (03.01.2025)
Published in Clinical chemistry (Baltimore, Md.) (03.01.2025)
Get full text
Journal Article
Early MRD Detection after CAR-T Associated with Poor Outcome in Patients with Large B-Cell Lymphoma
Krasnow, Nira, Maurer, Katie, Song, Catherine, Blewett, Timothy, Xiong, Kan, Crnjac, Andela, Gao, Lily, Rhoades, Justin, Merryman, Reid W., Gohil, Satyen, Duffy, Caitlyn, Guerrero, Liliana, McDonough, Mikaela M., Redd, Robert A., Jacene, Heather, Dela Cruz, Jamie, Budka, Justin, Mattie, Mike, Miles, Brodie, Neuberg, Donna S., Armand, Philippe, Wu, Catherine J., Adalsteinsson, Viktor, Jacobson, Caron A.
Published in Blood (05.11.2024)
Published in Blood (05.11.2024)
Get full text
Journal Article
DirectHRD enables sensitive scar-based classification of homologous recombination deficiency
Liu, Ruolin, Roberts, Eugenia, Parsons, Heather A, Stover, Elizabeth H, Choudhury, Atish D, Rhoades, Justin, Blewett, Timothy, Yang, David D, Liu, Joyce F, Mayer, Erica L, Adalsteinsson, Viktor A
Published in Nucleic acids research (22.04.2025)
Published in Nucleic acids research (22.04.2025)
Get full text
Journal Article
Duplex-Repair enables highly accurate sequencing, despite DNA damage
Xiong, Kan, Shea, Douglas, Rhoades, Justin, Blewett, Timothy, Liu, Ruolin, Bae, Jin H, Nguyen, Erica, Makrigiorgos, G Mike, Golub, Todd R, Adalsteinsson, Viktor A
Published in Nucleic acids research (11.01.2022)
Published in Nucleic acids research (11.01.2022)
Get full text
Journal Article
A Personalized Whole Genome-Informed Assay Targeting Single Mutant in Circulating Tumor DNA Can Identify MRD and Predict Relapse in DLBCL
Merryman, Reid W., Rhoades, Justin, Xiong, Kan, Antel, Katherine, An, Hyun Hwan, Redd, Robert A., McDonough, Mikaela M., Guerrero, Lillian, Crnjac, Andela, Sridhar, Sainetra, Blewett, Timothy, Chen, Ju, Dahi, Parastoo B., Nieto, Yago, Chen, Yi-Bin, Herrera, Alex F., Joyce, Robin M., Armand, Philippe, Murakami, Mark Alan, Adalsteinsson, Viktor
Published in Blood (02.11.2023)
Published in Blood (02.11.2023)
Get full text
Journal Article
Abstract PR06: Clonal evolution over narrow time frames via circulating tumor DNA in metastatic breast cancer
Weber, Zachary, Tallman, David, Stockaard, Sinclair, Collier, Katharine, Asad, Sarah, Rhoades, Justin, Freeman, Samuel, Parsons, Heather A., Tolaney, Sara M., Ha, Gavin, Adalsteinsson, Viktor A., Stover, Daniel G.
Published in Clinical cancer research (01.06.2020)
Published in Clinical cancer research (01.06.2020)
Get full text
Journal Article