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Rapid, Low-Cost Detection of Zika Virus Using Programmable Biomolecular Components
Pardee, Keith, Green, Alexander A., Takahashi, Melissa K., Braff, Dana, Lambert, Guillaume, Lee, Jeong Wook, Ferrante, Tom, Ma, Duo, Donghia, Nina, Fan, Melina, Daringer, Nichole M., Bosch, Irene, Dudley, Dawn M., O’Connor, David H., Gehrke, Lee, Collins, James J.
Published in Cell (19.05.2016)
Published in Cell (19.05.2016)
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Journal Article
Measuring immunity to SARS-CoV-2 infection: comparing assays and animal models
Khoury, David S., Wheatley, Adam K., Ramuta, Mitchell D., Reynaldi, Arnold, Cromer, Deborah, Subbarao, Kanta, O’Connor, David H., Kent, Stephen J., Davenport, Miles P.
Published in Nature reviews. Immunology (01.12.2020)
Published in Nature reviews. Immunology (01.12.2020)
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Journal Article
Transmission of SARS-CoV-2 in domestic cats imposes a narrow bottleneck
Braun, Katarina M., Moreno, Gage K., Halfmann, Peter J., Hodcroft, Emma B., Baker, David A., Boehm, Emma C., Weiler, Andrea M., Haj, Amelia K., Hatta, Masato, Chiba, Shiho, Maemura, Tadashi, Kawaoka, Yoshihiro, Koelle, Katia, O’Connor, David H., Friedrich, Thomas C.
Published in PLoS pathogens (01.02.2021)
Published in PLoS pathogens (01.02.2021)
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Journal Article
Acute SARS-CoV-2 infections harbor limited within-host diversity and transmit via tight transmission bottlenecks
Braun, Katarina M., Moreno, Gage K., Wagner, Cassia, Accola, Molly A., Rehrauer, William M., Baker, David A., Koelle, Katia, O’Connor, David H., Bedford, Trevor, Friedrich, Thomas C., Moncla, Louise H.
Published in PLoS pathogens (23.08.2021)
Published in PLoS pathogens (23.08.2021)
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Journal Article
Genetic diversity and evolutionary convergence of cryptic SARS- CoV-2 lineages detected via wastewater sequencing
Gregory, Devon A., Trujillo, Monica, Rushford, Clayton, Flury, Anna, Kannoly, Sherin, San, Kaung Myat, Lyfoung, Dustin T., Wiseman, Roger W., Bromert, Karen, Zhou, Ming-Yi, Kesler, Ellen, Bivens, Nathan J., Hoskins, Jay, Lin, Chung-Ho, O’Connor, David H., Wieberg, Chris, Wenzel, Jeff, Kantor, Rose S., Dennehy, John J., Johnson, Marc C.
Published in PLoS pathogens (01.10.2022)
Published in PLoS pathogens (01.10.2022)
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Journal Article
Oil immersed lossless total analysis system for integrated RNA extraction and detection of SARS-CoV-2
Juang, Duane S., Juang, Terry D., Dudley, Dawn M., Newman, Christina M., Accola, Molly A., Rehrauer, William M., Friedrich, Thomas C., O’Connor, David H., Beebe, David J.
Published in Nature communications (14.07.2021)
Published in Nature communications (14.07.2021)
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Journal Article
Optimizing direct RT-LAMP to detect transmissible SARS-CoV-2 from primary nasopharyngeal swab samples
Dudley, Dawn M., Newman, Christina M., Weiler, Andrea M., Ramuta, Mitchell D., Shortreed, Cecilia G., Heffron, Anna S., Accola, Molly A., Rehrauer, William M., Friedrich, Thomas C., O’Connor, David H.
Published in PloS one (31.12.2020)
Published in PloS one (31.12.2020)
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Journal Article
In Vitro Efficacy of Antiviral Agents against Omicron Subvariant BA.4.6
Takashita, Emi, Yamayoshi, Seiya, Halfmann, Peter, Wilson, Nancy, Ries, Hunter, Richardson, Alex, Bobholz, Max, Vuyk, William, Maddox, Robert, Baker, David A., Friedrich, Thomas C., O’Connor, David H., Uraki, Ryuta, Ito, Mutsumi, Sakai-Tagawa, Yuko, Adachi, Eisuke, Saito, Makoto, Koga, Michiko, Tsutsumi, Takeya, Iwatsuki-Horimoto, Kiyoko, Kiso, Maki, Yotsuyanagi, Hiroshi, Watanabe, Shinji, Hasegawa, Hideki, Imai, Masaki, Kawaoka, Yoshihiro
Published in The New England journal of medicine (01.12.2022)
Published in The New England journal of medicine (01.12.2022)
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Journal Article
Genetic diversity of 1,845 rhesus macaques improves genetic variation interpretation and identifies disease models
Wang, Jun, Wang, Meng, Moshiri, Ala, Harris, R. Alan, Raveendran, Muthuswamy, Nguyen, Tracy, Kim, Soohyun, Young, Laura, Wang, Keqing, Wiseman, Roger, O’Connor, David H., Johnson, Zach, Martinez, Melween, Montague, Michael J., Sayers, Ken, Lyke, Martha, Vallender, Eric, Stout, Tim, Li, Yumei, Thomasy, Sara M., Rogers, Jeffrey, Chen, Rui
Published in Nature communications (05.07.2024)
Published in Nature communications (05.07.2024)
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Journal Article
The landscape of antibody binding in SARS-CoV-2 infection
Heffron, Anna S., McIlwain, Sean J., Amjadi, Maya F., Baker, David A., Khullar, Saniya, Armbrust, Tammy, Halfmann, Peter J., Kawaoka, Yoshihiro, Sethi, Ajay K., Palmenberg, Ann C., Shelef, Miriam A., O’Connor, David H., Ong, Irene M.
Published in PLoS biology (18.06.2021)
Published in PLoS biology (18.06.2021)
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Journal Article
Amplicon sequencing of pasteurized retail dairy enables genomic surveillance of H5N1 avian influenza virus in United States cattle
Lail, Andrew J., Vuyk, William C., Machkovech, Heather, Minor, Nicholas R., Hassan, Nura R., Dalvie, Rhea, Emmen, Isla E., Wolf, Sydney, Kalweit, Annabelle, Wilson, Nancy, Newman, Christina M., Tiburcio, Patrick Barros, Weiler, Andrea, Friedrich, Thomas C., O’Connor, David H.
Published in PloS one (13.06.2025)
Published in PloS one (13.06.2025)
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Journal Article
Clade IIb Mpox virus (MPXV) vertical transmission and fetal demise in a pregnant rhesus macaque model
Krabbe, Nicholas P., Mitzey, Ann M., Bhattacharya, Saswati, Razo, Elaina R., Zeng, Xiankun, Bekiares, Nell, Moy, Amy, Kamholz, Amy, Karl, Julie A., Daggett, Gregory, VanSleet, Grace, Morgan, Terry, Capuano, Saverio V., Simmons, Heather A., Basu, Puja, Weiler, Andrea M., O’Connor, David H., Friedrich, Thomas C., Golos, Thaddeus G., Mohr, Emma L.
Published in PloS one (01.04.2025)
Published in PloS one (01.04.2025)
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Journal Article
SARS-CoV-2 Genomic Surveillance from Community-Distributed Rapid Antigen Tests, Wisconsin, USA
Emmen, Isla E., Vuyk, William C., Lail, Andrew J., Wolf, Sydney, O’Connor, Eli J., Dalvie, Rhea, Bhasin, Maansi, Virdi, Aanya, White, Caroline, Hassan, Nura R., Richardson, Alex, VanSleet, Grace, Weiler, Andrea, Rounds-Dunn, Savannah, Van Horn, Kenneth, Gartler, Marc, Jorgenson, Jane, Spelman, Michael, Ottosen, Sean, Minor, Nicholas R., Wilson, Nancy, Friedrich, Thomas C., O’Connor, David H.
Published in Emerging infectious diseases (01.05.2025)
Published in Emerging infectious diseases (01.05.2025)
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Journal Article
Shedding of infectious SARS-CoV-2 despite vaccination
Riemersma, Kasen K., Haddock, Luis A., Wilson, Nancy A., Minor, Nicholas, Eickhoff, Jens, Grogan, Brittany E., Kita-Yarbro, Amanda, Halfmann, Peter J., Segaloff, Hannah E., Kocharian, Anna, Florek, Kelsey R., Westergaard, Ryan, Bateman, Allen, Jeppson, Gunnar E., Kawaoka, Yoshihiro, O’Connor, David H., Friedrich, Thomas C., Grande, Katarina M.
Published in PLoS pathogens (01.09.2022)
Published in PLoS pathogens (01.09.2022)
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Journal Article
Blood Distribution of SARS-CoV‑2 Lipid Nanoparticle mRNA Vaccine in Humans
Kent, Stephen J., Li, Shiyao, Amarasena, Thakshila H., Reynaldi, Arnold, Lee, Wen Shi, Leeming, Michael G., O’Connor, David H., Nguyen, Julie, Kent, Helen E., Caruso, Frank, Juno, Jennifer A., Wheatley, Adam K., Davenport, Miles P., Ju, Yi
Published in ACS nano (01.10.2024)
Published in ACS nano (01.10.2024)
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Journal Article
Viral Sequencing to Investigate Sources of SARS-CoV-2 Infection in US Healthcare Personnel
Braun, Katarina M, Moreno, Gage K, Buys, Ashley, Somsen, Elizabeth D, Bobholz, Max, Accola, Molly A, Anderson, Laura, Rehrauer, William M, Baker, David A, Safdar, Nasia, Lepak, Alexander J, O’Connor, David H, Friedrich, Thomas C
Published in Clinical infectious diseases (15.09.2021)
Published in Clinical infectious diseases (15.09.2021)
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Journal Article
The Role of MHC-E in T Cell Immunity Is Conserved among Humans, Rhesus Macaques, and Cynomolgus Macaques
Wu, Helen L, Wiseman, Roger W, Hughes, Colette M, Webb, Gabriela M, Abdulhaqq, Shaheed A, Bimber, Benjamin N, Hammond, Katherine B, Reed, Jason S, Gao, Lina, Burwitz, Benjamin J, Greene, Justin M, Ferrer, Fidel, Legasse, Alfred W, Axthelm, Michael K, Park, Byung S, Brackenridge, Simon, Maness, Nicholas J, McMichael, Andrew J, Picker, Louis J, O’Connor, David H, Hansen, Scott G, Sacha, Jonah B
Published in The Journal of immunology (1950) (01.01.2018)
Published in The Journal of immunology (1950) (01.01.2018)
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Journal Article
Isolation of Diverse Simian Arteriviruses Causing Hemorrhagic Disease
Shaw, Teressa M., Dettle, Samuel T., Mejia, Andres, Hayes, Jennifer M., Simmons, Heather A., Basu, Puja, Kuhn, Jens H., Ramuta, Mitchell D., Warren, Cody J., Jahrling, Peter B., O’Connor, David H., Huang, Liupei, Zaeem, Misbah, Seo, Jiwon, Slukvin, Igor I., Brown, Matthew E., Bailey, Adam L.
Published in Emerging infectious diseases (01.04.2024)
Published in Emerging infectious diseases (01.04.2024)
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Journal Article
Anti-membrane Antibodies Persist at Least One Year and Discriminate Between Past Coronavirus Disease 2019 Infection and Vaccination
Amjadi, Maya F, Adyniec, Ryan R, Gupta, Srishti, Bashar, S Janna, Mergaert, Aisha M, Braun, Katarina M, Moreno, Gage K, O’Connor, David H, Friedrich, Thomas C, Safdar, Nasia, McCoy, Sara S, Shelef, Miriam A
Published in The Journal of infectious diseases (01.12.2022)
Published in The Journal of infectious diseases (01.12.2022)
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Journal Article
Using barcoded Zika virus to assess virus population structure in vitro and in Aedes aegypti mosquitoes
Weger-Lucarelli, James, Garcia, Selene M., Rückert, Claudia, Byas, Alex, O’Connor, Shelby L., Aliota, Matthew T., Friedrich, Thomas C., O’Connor, David H., Ebel, Gregory D.
Published in Virology (New York, N.Y.) (01.08.2018)
Published in Virology (New York, N.Y.) (01.08.2018)
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Journal Article