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Metabolite Sequestration Enables Rapid Recovery from Fatty Acid Depletion in Escherichia coli
Hartline, Christopher J., Mannan, Ahmad A., Liu, Di, Zhang, Fuzhong, Oyarzún, Diego A.
Published in mBio (17.03.2020)
Published in mBio (17.03.2020)
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Journal Article
Integrating Kinetic Model of E. coli with Genome Scale Metabolic Fluxes Overcomes Its Open System Problem and Reveals Bistability in Central Metabolism
Mannan, Ahmad A., Toya, Yoshihiro, Shimizu, Kazuyuki, McFadden, Johnjoe, Kierzek, Andrzej M., Rocco, Andrea
Published in PloS one (15.10.2015)
Published in PloS one (15.10.2015)
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Journal Article
Modeling and simulation of the main metabolism in Escherichia coli and its several single-gene knockout mutants with experimental verification
Kadir, Tuty Asmawaty Abdul, Mannan, Ahmad A, Kierzek, Andrzej M, McFadden, Johnjoe, Shimizu, Kazuyuki
Published in Microbial cell factories (19.11.2010)
Published in Microbial cell factories (19.11.2010)
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Journal Article
gcFront: a tool for determining a Pareto front of growth-coupled cell factory designs
Legon, Laurence, Corre, Christophe, Bates, Declan G, Mannan, Ahmad A
Published in Bioinformatics (11.07.2022)
Published in Bioinformatics (11.07.2022)
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Journal Article
Dynamic metabolic control: towards precision engineering of metabolism
Liu, Di, Mannan, Ahmad A, Han, Yichao, Oyarzún, Diego A, Zhang, Fuzhong
Published in Journal of industrial microbiology & biotechnology (01.07.2018)
Published in Journal of industrial microbiology & biotechnology (01.07.2018)
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Journal Article
Fundamental Design Principles for Transcription-Factor-Based Metabolite Biosensors
Mannan, Ahmad A, Liu, Di, Zhang, Fuzhong, Oyarzún, Diego A
Published in ACS synthetic biology (20.10.2017)
Published in ACS synthetic biology (20.10.2017)
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Journal Article
MUFINS: multi-formalism interaction network simulator
Wu, Huihai, von Kamp, Axel, Leoncikas, Vytautas, Mori, Wataru, Sahin, Nilgun, Gevorgyan, Albert, Linley, Catherine, Grabowski, Marek, Mannan, Ahmad A, Stoy, Nicholas, Stewart, Graham R, Ward, Lara T, Lewis, David J M, Sroka, Jacek, Matsuno, Hiroshi, Klamt, Steffen, Westerhoff, Hans V, McFadden, Johnjoe, Plant, Nicholas J, Kierzek, Andrzej M
Published in NPJ systems biology and applications (17.11.2016)
Published in NPJ systems biology and applications (17.11.2016)
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Journal Article
Trade-Offs in Biosensor Optimization for Dynamic Pathway Engineering
Verma, Babita K, Mannan, Ahmad A, Zhang, Fuzhong, Oyarzún, Diego A
Published in ACS synthetic biology (21.01.2022)
Published in ACS synthetic biology (21.01.2022)
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Journal Article
Multiobjective optimization of gene circuits for metabolic engineering
Otero-Muras, Irene, Mannan, Ahmad A., Banga, Julio R., Oyarzún, Diego A.
Published in IFAC-PapersOnLine (2019)
Published in IFAC-PapersOnLine (2019)
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Journal Article
Comparison of closed loop control strategies for the activation of genetic switches
Darlington, Alexander P.S., Mannan, Ahmad A., Bates, Declan G.
Published in Proceedings of the IEEE Conference on Decision & Control (16.12.2024)
Published in Proceedings of the IEEE Conference on Decision & Control (16.12.2024)
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