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A petavoxel fragment of human cerebral cortex reconstructed at nanoscale resolution
Shapson-Coe, Alexander, Januszewski, Michał, Berger, Daniel R., Pope, Art, Wu, Yuelong, Blakely, Tim, Schalek, Richard L., Li, Peter H., Wang, Shuohong, Maitin-Shepard, Jeremy, Karlupia, Neha, Dorkenwald, Sven, Sjostedt, Evelina, Leavitt, Laramie, Lee, Dongil, Troidl, Jakob, Collman, Forrest, Bailey, Luke, Fitzmaurice, Angerica, Kar, Rohin, Field, Benjamin, Wu, Hank, Wagner-Carena, Julian, Aley, David, Lau, Joanna, Lin, Zudi, Wei, Donglai, Pfister, Hanspeter, Peleg, Adi, Jain, Viren, Lichtman, Jeff W.
Published in Science (American Association for the Advancement of Science) (10.05.2024)
Published in Science (American Association for the Advancement of Science) (10.05.2024)
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Journal Article
Automated synapse-level reconstruction of neural circuits in the larval zebrafish brain
Svara, Fabian, Förster, Dominique, Kubo, Fumi, Januszewski, Michał, dal Maschio, Marco, Schubert, Philipp J., Kornfeld, Jörgen, Wanner, Adrian A., Laurell, Eva, Denk, Winfried, Baier, Herwig
Published in Nature methods (01.11.2022)
Published in Nature methods (01.11.2022)
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Journal Article
Learning cellular morphology with neural networks
Schubert, Philipp J., Dorkenwald, Sven, Januszewski, Michał, Jain, Viren, Kornfeld, Joergen
Published in Nature communications (21.06.2019)
Published in Nature communications (21.06.2019)
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Journal Article
Visual recognition of social signals by a tectothalamic neural circuit
Kappel, Johannes M., Förster, Dominique, Slangewal, Katja, Shainer, Inbal, Svara, Fabian, Donovan, Joseph C., Sherman, Shachar, Januszewski, Michał, Baier, Herwig, Larsch, Johannes
Published in Nature (London) (04.08.2022)
Published in Nature (London) (04.08.2022)
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Journal Article
GPU-based acceleration of free energy calculations in solid state physics
Januszewski, Michał, Ptok, Andrzej, Crivelli, Dawid, Gardas, Bartłomiej
Published in Computer physics communications (01.07.2015)
Published in Computer physics communications (01.07.2015)
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Journal Article
Connectome-driven neural inventory of a complete visual system
Nern, Aljoscha, Loesche, Frank, Takemura, Shin-ya, Burnett, Laura E., Dreher, Marisa, Gruntman, Eyal, Hoeller, Judith, Huang, Gary B., Januszewski, Michał, Klapoetke, Nathan C., Koskela, Sanna, Longden, Kit D., Lu, Zhiyuan, Preibisch, Stephan, Qiu, Wei, Rogers, Edward M., Seenivasan, Pavithraa, Zhao, Arthur, Bogovic, John, Canino, Brandon S., Clements, Jody, Cook, Michael, Finley-May, Samantha, Flynn, Miriam A., Hameed, Imran, Fragniere, Alexandra M. C., Hayworth, Kenneth J., Hopkins, Gary Patrick, Hubbard, Philip M., Katz, William T., Kovalyak, Julie, Lauchie, Shirley A., Leonard, Meghan, Lohff, Alanna, Maldonado, Charli A., Mooney, Caroline, Okeoma, Nneoma, Olbris, Donald J., Ordish, Christopher, Paterson, Tyler, Phillips, Emily M., Pietzsch, Tobias, Salinas, Jennifer Rivas, Rivlin, Patricia K., Schlegel, Philipp, Scott, Ashley L., Scuderi, Louis A., Takemura, Satoko, Talebi, Iris, Thomson, Alexander, Trautman, Eric T., Umayam, Lowell, Walsh, Claire, Walsh, John J., Xu, C. Shan, Yakal, Emily A., Yang, Tansy, Zhao, Ting, Funke, Jan, George, Reed, Hess, Harald F., Jefferis, Gregory S. X. E., Knecht, Christopher, Korff, Wyatt, Plaza, Stephen M., Romani, Sandro, Saalfeld, Stephan, Scheffer, Louis K., Berg, Stuart, Rubin, Gerald M., Reiser, Michael B.
Published in Nature (London) (29.05.2025)
Published in Nature (London) (29.05.2025)
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Journal Article
Defining the molecular identity and morphology of glia limitans superficialis astrocytes in vertebrates
Hasel, Philip, Cooper, Melissa L., Marchildon, Anne E., Rufen-Blanchette, Uriel, Kim, Rachel D., Ma, Thong C., Groh, Adam M.R., Hill, Emily J., Lewis, Eleanor M., Januszewski, Michał, Light, Sarah E.W., Smith, Cody J., Stratton, Jo Anne, Sloan, Steven A., Kang, Un Jung, Chao, Moses V., Liddelow, Shane A.
Published in Cell reports (Cambridge) (25.03.2025)
Published in Cell reports (Cambridge) (25.03.2025)
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Journal Article
High-precision automated reconstruction of neurons with flood-filling networks
Januszewski, Michał, Kornfeld, Jörgen, Li, Peter H., Pope, Art, Blakely, Tim, Lindsey, Larry, Maitin-Shepard, Jeremy, Tyka, Mike, Denk, Winfried, Jain, Viren
Published in Nature methods (01.08.2018)
Published in Nature methods (01.08.2018)
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Journal Article
Gas cluster ion beam SEM for imaging of large tissue samples with 10 nm isotropic resolution
Hayworth, Kenneth J., Peale, David, Januszewski, Michał, Knott, Graham W., Lu, Zhiyuan, Xu, C. Shan, Hess, Harald F.
Published in Nature methods (01.01.2020)
Published in Nature methods (01.01.2020)
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Journal Article
Multi-layered maps of neuropil with segmentation-guided contrastive learning
Dorkenwald, Sven, Li, Peter H., Januszewski, Michał, Berger, Daniel R., Maitin-Shepard, Jeremy, Bodor, Agnes L., Collman, Forrest, Schneider-Mizell, Casey M., da Costa, Nuno Maçarico, Lichtman, Jeff W., Jain, Viren
Published in Nature methods (01.12.2023)
Published in Nature methods (01.12.2023)
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Journal Article
Light-microscopy-based connectomic reconstruction of mammalian brain tissue
Tavakoli, Mojtaba R., Lyudchik, Julia, Januszewski, Michał, Vistunou, Vitali, Agudelo Dueñas, Nathalie, Vorlaufer, Jakob, Sommer, Christoph, Kreuzinger, Caroline, Oliveira, Bárbara, Cenameri, Alban, Novarino, Gaia, Jain, Viren, Danzl, Johann G.
Published in Nature (London) (12.06.2025)
Published in Nature (London) (12.06.2025)
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Journal Article
SyConn2: dense synaptic connectivity inference for volume electron microscopy
Schubert, Philipp J., Dorkenwald, Sven, Januszewski, Michał, Klimesch, Jonathan, Svara, Fabian, Mancu, Andrei, Ahmad, Hashir, Fee, Michale S., Jain, Viren, Kornfeld, Joergen
Published in Nature methods (01.11.2022)
Published in Nature methods (01.11.2022)
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Journal Article
Paired and solitary ionocytes in the zebrafish olfactory epithelium
Peloggia, Julia, Cheung, King Yee, Petkova, Mariela D, Schalek, Richard, Boulanger-Weill, Jonathan, Wu, Yuelong, Wang, Shuohong, van Hateren, Nicholas J, Januszewski, Michał, Jain, Viren, Lichtman, Jeff W, Engert, Florian, Piotrowski, Tatjana, Whitfield, Tanya T, Jesuthasan, Suresh
Published in Chemical senses (22.01.2025)
Published in Chemical senses (22.01.2025)
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Journal Article
Publisher Correction: Gas cluster ion beam SEM for imaging of large tissue samples with 10 nm isotropic resolution
Hayworth, Kenneth J., Peale, David, Januszewski, Michał, Knott, Graham W., Lu, Zhiyuan, Xu, C. Shan, Hess, Harald F.
Published in Nature methods (01.01.2020)
Published in Nature methods (01.01.2020)
Get full text
Journal Article
Connectome-driven neural inventory of a complete visual system
Nern, Aljoscha, Loesche, Frank, Takemura, Shin-Ya, Burnett, Laura E, Dreher, Marisa, Gruntman, Eyal, Hoeller, Judith, Huang, Gary B, Januszewski, Michał, Klapoetke, Nathan C, Koskela, Sanna, Longden, Kit D, Lu, Zhiyuan, Preibisch, Stephan, Qiu, Wei, Rogers, Edward M, Seenivasan, Pavithraa, Zhao, Arthur, Bogovic, John, Canino, Brandon S, Clements, Jody, Cook, Michael, Finley-May, Samantha, Flynn, Miriam A, Hameed, Imran, Fragniere, Alexandra Mc, Hayworth, Kenneth J, Hopkins, Gary Patrick, Hubbard, Philip M, Katz, William T, Kovalyak, Julie, Lauchie, Shirley A, Leonard, Meghan, Lohff, Alanna, Maldonado, Charli A, Mooney, Caroline, Okeoma, Nneoma, Olbris, Donald J, Ordish, Christopher, Paterson, Tyler, Phillips, Emily M, Pietzsch, Tobias, Salinas, Jennifer Rivas, Rivlin, Patricia K, Schlegel, Philipp, Scott, Ashley L, Scuderi, Louis A, Takemura, Satoko, Talebi, Iris, Thomson, Alexander, Trautman, Eric T, Umayam, Lowell, Walsh, Claire, Walsh, John J, Xu, C Shan, Yakal, Emily A, Yang, Tansy, Zhao, Ting, Funke, Jan, George, Reed, Hess, Harald F, Jefferis, Gregory Sxe, Knecht, Christopher, Korff, Wyatt, Plaza, Stephen M, Romani, Sandro, Saalfeld, Stephan, Scheffer, Louis K, Berg, Stuart, Rubin, Gerald M, Reiser, Michael B
Published in bioRxiv (01.06.2024)
Published in bioRxiv (01.06.2024)
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Journal Article
Paper
A connectomic study of a petascale fragment of human cerebral cortex
Shapson-Coe, Alexander, Januszewski, Michal, Berger, Daniel R, Pope, Art, Wu, Yuelong, Blakely, Tim, Schalek, Richard L, Li, Peter H, Wang, Shuohong, Maitlin-Shepard, Jeremy, Karlupia, Neha, Dorkenwald, Sven, Sjostedt, Evelina, Leavitt, Laramie, Lee, Dongil, Bailey, Luke, Fitzmaurice, Angerica, Kar, Rohin, Field, Benjamin, Wu, Hank, Wagner-Carena, Julian, Aley, David, Lau, Joanna, Lin, Zudi, Donglai Wei, Pfister, Hanspeter, Peleg, Adi, Jain, Viren, Lichtman, Jeff W
Published in bioRxiv (25.11.2021)
Published in bioRxiv (25.11.2021)
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Paper
Automated Reconstruction of a Serial-Section EM Drosophila Brain with Flood-Filling Networks and Local Realignment
Li, Peter H., Lindsey, Larry F., Januszewski, Michał, Tyka, Mike, Maitin-Shepard, Jeremy, Blakely, Tim, Jain, Viren
Published in Microscopy and microanalysis (01.08.2019)
Published in Microscopy and microanalysis (01.08.2019)
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Journal Article