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Highly multiplexed immunofluorescence imaging of human tissues and tumors using t-CyCIF and conventional optical microscopes
Lin, Jia-Ren, Izar, Benjamin, Wang, Shu, Yapp, Clarence, Mei, Shaolin, Shah, Parin M, Santagata, Sandro, Sorger, Peter K
Published in eLife (11.07.2018)
Published in eLife (11.07.2018)
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Journal Article
Non-cell-autonomous cancer progression from chromosomal instability
Li, Jun, Hubisz, Melissa J., Earlie, Ethan M., Duran, Mercedes A., Hong, Christy, Varela, Austin A., Lettera, Emanuele, Deyell, Matthew, Tavora, Bernardo, Havel, Jonathan J., Phyu, Su M., Amin, Amit Dipak, Budre, Karolina, Kamiya, Erina, Cavallo, Julie-Ann, Garris, Christopher, Powell, Simon, Reis-Filho, Jorge S., Wen, Hannah, Bettigole, Sarah, Khan, Atif J., Izar, Benjamin, Parkes, Eileen E., Laughney, Ashley M., Bakhoum, Samuel F.
Published in Nature (London) (31.08.2023)
Published in Nature (London) (31.08.2023)
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Journal Article
Qualifying antibodies for image-based immune profiling and multiplexed tissue imaging
Du, Ziming, Lin, Jia-Ren, Rashid, Rumana, Maliga, Zoltan, Wang, Shu, Aster, Jon C., Izar, Benjamin, Sorger, Peter K., Santagata, Sandro
Published in Nature protocols (01.10.2019)
Published in Nature protocols (01.10.2019)
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Journal Article
Adaptive resistance of melanoma cells to RAF inhibition via reversible induction of a slowly dividing de‐differentiated state
Fallahi‐Sichani, Mohammad, Becker, Verena, Izar, Benjamin, Baker, Gregory J, Lin, Jia‐Ren, Boswell, Sarah A, Shah, Parin, Rotem, Asaf, Garraway, Levi A, Sorger, Peter K
Published in Molecular systems biology (01.01.2017)
Published in Molecular systems biology (01.01.2017)
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Journal Article
Alternative to the soft-agar assay that permits high-throughput drug and genetic screens for cellular transformation
Rotem, Asaf, Janzer, Andreas, Izar, Benjamin, Ji, Zhe, Doench, John G., Garraway, Levi A., Struhl, Kevin
Published in Proceedings of the National Academy of Sciences - PNAS (05.05.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (05.05.2015)
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Journal Article
An activation to memory differentiation trajectory of tumor-infiltrating lymphocytes informs metastatic melanoma outcomes
Jaiswal, Abhinav, Verma, Akanksha, Dannenfelser, Ruth, Melssen, Marit, Tirosh, Itay, Izar, Benjamin, Kim, Tae-Gyun, Nirschl, Christopher J., Devi, K. Sanjana P., Olson, Walter C., Slingluff, Craig L., Engelhard, Victor H., Garraway, Levi, Regev, Aviv, Minkis, Kira, Yoon, Charles H., Troyanskaya, Olga, Elemento, Olivier, Suárez-Fariñas, Mayte, Anandasabapathy, Niroshana
Published in Cancer cell (09.05.2022)
Published in Cancer cell (09.05.2022)
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Journal Article
Smoother: a unified and modular framework for incorporating structural dependency in spatial omics data
Su, Jiayu, Reynier, Jean-Baptiste, Fu, Xi, Zhong, Guojie, Jiang, Jiahao, Escalante, Rydberg Supo, Wang, Yiping, Aparicio, Luis, Izar, Benjamin, Knowles, David A., Rabadan, Raul
Published in Genome Biology (18.12.2023)
Published in Genome Biology (18.12.2023)
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Journal Article
Neoadjuvant durvalumab plus radiation versus durvalumab alone in stages I–III non-small cell lung cancer: survival outcomes and molecular correlates of a randomized phase II trial
Altorki, Nasser K., Walsh, Zachary H., Melms, Johannes C., Port, Jeffery L., Lee, Benjamin E., Nasar, Abu, Spinelli, Cathy, Caprio, Lindsay, Rogava, Meri, Ho, Patricia, Christos, Paul J., Saxena, Ashish, Elemento, Olivier, Bhinder, Bhavneet, Ager, Casey, Amin, Amit Dipak, Sanfilippo, Nicholas J., Mittal, Vivek, Borczuk, Alain C., Formenti, Silvia C., Izar, Benjamin, McGraw, Timothy E.
Published in Nature communications (19.12.2023)
Published in Nature communications (19.12.2023)
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Journal Article
Contribution of Trp63CreERT2-labeled cells to alveolar regeneration is independent of tuft cells
Huang, Huachao, Fang, Yinshan, Jiang, Ming, Zhang, Yihan, Biermann, Jana, Melms, Johannes C, Danielsson, Jennifer A, Yang, Ying, Qiang, Li, Liu, Jia, Zhou, Yiwu, Wang, Manli, Hu, Zhihong, Wang, Timothy C, Saqi, Anjali, Sun, Jie, Matsumoto, Ichiro, Cardoso, Wellington V, Emala, Charles W, Zhu, Jian, Izar, Benjamin, Mou, Hongmei, Que, Jianwen
Published in eLife (21.09.2022)
Published in eLife (21.09.2022)
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Journal Article
Impact of Sequencing Radiation Therapy and Immune Checkpoint Inhibitors in the Treatment of Melanoma Brain Metastases
Pomeranz Krummel, Daniel A., Nasti, Tahseen H., Izar, Benjamin, Press, Robert H., Xu, Maxwell, Lowder, Lindsey, Kallay, Laura, Rupji, Manali, Rosen, Havi, Su, Jing, Curran, Walter, Olson, Jeffrey, Weinberg, Brent, Schniederjan, Matthew, Neill, Stewart, Lawson, David, Kowalski, Jeanne, Khan, Mohammad K., Sengupta, Soma
Published in International journal of radiation oncology, biology, physics (01.09.2020)
Published in International journal of radiation oncology, biology, physics (01.09.2020)
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Journal Article
Comparison of Devices Used for Stent-Assisted Coiling of Intracranial Aneurysms
Izar, Benjamin, Rai, Ansaar, Raghuram, Karthikram, Rotruck, Jill, Carpenter, Jeffrey
Published in PloS one (22.09.2011)
Published in PloS one (22.09.2011)
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Journal Article
The Impact of EGFR Mutation Status on Outcomes in Patients With Resected Stage I Non-Small Cell Lung Cancers
Izar, Benjamin, Sequist, Lecia, Lee, Mihan, Muzikansky, Alona, Heist, Rebecca, Iafrate, John, Dias-Santagata, Dora, Mathisen, Douglas, Lanuti, Michael
Published in The Annals of thoracic surgery (01.09.2013)
Published in The Annals of thoracic surgery (01.09.2013)
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Journal Article
Inhibition of Haspin Kinase Promotes Cell-Intrinsic and Extrinsic Antitumor Activity
Melms, Johannes C., Vallabhaneni, Sreeram, Mills, Caitlin E., Yapp, Clarence, Chen, Jia-Yun, Morelli, Eugenio, Waszyk, Patricia, Kumar, Sushil, Deming, Derrick, Moret, Nienke, Rodriguez, Steven, Subramanian, Kartik, Rogava, Meri, Cartwright, Adam N.R., Luoma, Adrienne, Mei, Shaolin, Brinker, Titus J., Miller, David M., Spektor, Alexander, Schadendorf, Dirk, Riggi, Nicolo, Wucherpfennig, Kai W., Sorger, Peter K., Izar, Benjamin
Published in Cancer research (Chicago, Ill.) (15.02.2020)
Published in Cancer research (Chicago, Ill.) (15.02.2020)
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Journal Article
Author Correction: Neoadjuvant durvalumab plus radiation versus durvalumab alone in stages I–III non-small cell lung cancer: survival outcomes and molecular correlates of a randomized phase II trial
Altorki, Nasser K., Walsh, Zachary H., Melms, Johannes C., Port, Jeffery L., Lee, Benjamin E., Nasar, Abu, Spinelli, Cathy, Caprio, Lindsay, Rogava, Meri, Ho, Patricia, Christos, Paul J., Saxena, Ashish, Elemento, Olivier, Bhinder, Bhavneet, Ager, Casey, Amin, Amit Dipak, Sanfilippo, Nicholas J., Mittal, Vivek, Borczuk, Alain C., Formenti, Silvia C., Izar, Benjamin, McGraw, Timothy E.
Published in Nature communications (03.01.2024)
Published in Nature communications (03.01.2024)
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Journal Article
Universal Stress Proteins Are Important for Oxidative and Acid Stress Resistance and Growth of Listeria monocytogenes EGD-e In Vitro and In Vivo
Seifart Gomes, Christa, Izar, Benjamin, Pazan, Farhad, Mohamed, Walid, Mraheil, Mobarak Abu, Mukherjee, Krishnendu, Billion, André, Aharonowitz, Yair, Chakraborty, Trinad, Hain, Torsten
Published in PloS one (30.09.2011)
Published in PloS one (30.09.2011)
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Journal Article
Listeria monocytogenes Induces a Virulence-Dependent microRNA Signature That Regulates the Immune Response in Galleria mellonella
Mannala, Gopala K, Izar, Benjamin, Rupp, Oliver, Schultze, Tilman, Goesmann, Alexander, Chakraborty, Trinad, Hain, Torsten
Published in Frontiers in microbiology (12.12.2017)
Published in Frontiers in microbiology (12.12.2017)
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Journal Article
Intermittent MEK inhibition for the treatment of metastatic uveal melanoma
Khan, Shaheer, Patel, Sapna P., Shoushtari, Alexander N., Ambrosini, Grazia, Cremers, Serge, Lee, Shing, Franks, Lauren, Singh-Kandah, Shahnaz, Hernandez, Susana, Sender, Naomi, Vuolo, Kristina, Nesson, Alexandra, Mundi, Prabhjot, Izar, Benjamin, Schwartz, Gary K., Carvajal, Richard D.
Published in Frontiers in oncology (29.09.2022)
Published in Frontiers in oncology (29.09.2022)
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Journal Article
Effects of Label Noise on Deep Learning-Based Skin Cancer Classification
Hekler, Achim, Kather, Jakob N., Krieghoff-Henning, Eva, Utikal, Jochen S., Meier, Friedegund, Gellrich, Frank F., Upmeier zu Belzen, Julius, French, Lars, Schlager, Justin G., Ghoreschi, Kamran, Wilhelm, Tabea, Kutzner, Heinz, Berking, Carola, Heppt, Markus V., Haferkamp, Sebastian, Sondermann, Wiebke, Schadendorf, Dirk, Schilling, Bastian, Izar, Benjamin, Maron, Roman, Schmitt, Max, Fröhling, Stefan, Lipka, Daniel B., Brinker, Titus J.
Published in Frontiers in medicine (06.05.2020)
Published in Frontiers in medicine (06.05.2020)
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Journal Article
KLRG1 marks tumor-infiltrating CD4 T cell subsets associated with tumor progression and immunotherapy response
Ager, Casey R, Zhang, Mingxuan, Chaimowitz, Matthew, Bansal, Shruti, Tagore, Somnath, Obradovic, Aleksandar, Jugler, Collin, Rogava, Meri, Melms, Johannes C, McCann, Patrick, Spina, Catherine, Drake, Charles G, Dallos, Matthew C, Izar, Benjamin
Published in Journal for immunotherapy of cancer (01.09.2023)
Published in Journal for immunotherapy of cancer (01.09.2023)
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Journal Article
Central Nervous System Metastases from Primary Lung Carcinoma: Significance of RNA Fusion Testing and Early Versus Late Metastases
Garlin Politis, Michelle, Mansukhani, Mahesh, Herzberg, Benjamin O., Chen, Lanyi N., Stoopler, Mark, Saliba, Maelle, Siegelin, Markus, Zhu, Zhe, Sonett, Joshua, Henick, Brian S., Cheng, Simon K., Acharyya, Swarnali, Shu, Catherine A., Miller, Michael L., Izar, Benjamin, Fernandes, Helen, Hsiao, Susan, Saqi, Anjali
Published in Journal of personalized medicine (01.05.2025)
Published in Journal of personalized medicine (01.05.2025)
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Journal Article