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Ecological plant epigenetics: Evidence from model and non‐model species, and the way forward
Richards, Christina L., Alonso, Conchita, Becker, Claude, Bossdorf, Oliver, Bucher, Etienne, Colomé‐Tatché, Maria, Durka, Walter, Engelhardt, Jan, Gaspar, Bence, Gogol‐Döring, Andreas, Grosse, Ivo, van Gurp, Thomas P., Heer, Katrin, Kronholm, Ilkka, Lampei, Christian, Latzel, Vít, Mirouze, Marie, Opgenoorth, Lars, Paun, Ovidiu, Prohaska, Sonja J., Rensing, Stefan A., Stadler, Peter F., Trucchi, Emiliano, Ullrich, Kristian, Verhoeven, Koen J. F., Coulson, Tim
Published in Ecology letters (01.12.2017)
Published in Ecology letters (01.12.2017)
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Journal Article
A Helitron transposon reconstructed from bats reveals a novel mechanism of genome shuffling in eukaryotes
Grabundzija, Ivana, Messing, Simon A., Thomas, Jainy, Cosby, Rachel L., Bilic, Ilija, Miskey, Csaba, Gogol-Döring, Andreas, Kapitonov, Vladimir, Diem, Tanja, Dalda, Anna, Jurka, Jerzy, Pritham, Ellen J., Dyda, Fred, Izsvák, Zsuzsanna, Ivics, Zoltán
Published in Nature communications (02.03.2016)
Published in Nature communications (02.03.2016)
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Journal Article
Ultra-deep profiling of alternatively spliced Drosophila Dscam isoforms by circularization-assisted multi-segment sequencing
Sun, Wei, You, Xintian, Gogol-Döring, Andreas, He, Haihuai, Kise, Yoshiaki, Sohn, Madlen, Chen, Tao, Klebes, Ansgar, Schmucker, Dietmar, Chen, Wei
Published in The EMBO journal (17.07.2013)
Published in The EMBO journal (17.07.2013)
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Journal Article
Integrative analysis revealed the molecular mechanism underlying RBM10‐mediated splicing regulation
Wang, Yongbo, Gogol‐Döring, Andreas, Hu, Hao, Fröhler, Sebastian, Ma, Yunxia, Jens, Marvin, Maaskola, Jonas, Murakawa, Yasuhiro, Quedenau, Claudia, Landthaler, Markus, Kalscheuer, Vera, Wieczorek, Dagmar, Wang, Yang, Hu, Yuhui, Chen, Wei
Published in EMBO molecular medicine (01.09.2013)
Published in EMBO molecular medicine (01.09.2013)
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Journal Article
The Two Prevalent Genotypes of an Emerging Infectious Disease, Deformed Wing Virus, Cause Equally Low Pupal Mortality and Equally High Wing Deformities in Host Honey Bees
Tehel, Anja, Vu, Quynh, Bigot, Diane, Gogol-Döring, Andreas, Koch, Peter, Jenkins, Christina, Doublet, Vincent, Theodorou, Panagiotis, Paxton, Robert
Published in Viruses (29.01.2019)
Published in Viruses (29.01.2019)
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Journal Article
RNA-guided retargeting of Sleeping Beauty transposition in human cells
Kovač, Adrian, Miskey, Csaba, Menzel, Michael, Grueso, Esther, Gogol-Döring, Andreas, Ivics, Zoltán
Published in eLife (06.03.2020)
Published in eLife (06.03.2020)
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Journal Article
NoPeak: k-mer-based motif discovery in ChIP-Seq data without peak calling
Menzel, Michael, Hurka, Sabine, Glasenhardt, Stefan, Gogol-Döring, Andreas
Published in Bioinformatics (05.05.2021)
Published in Bioinformatics (05.05.2021)
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Journal Article
Unity in defence: honeybee workers exhibit conserved molecular responses to diverse pathogens
Doublet, Vincent, Poeschl, Yvonne, Gogol-Döring, Andreas, Alaux, Cédric, Annoscia, Desiderato, Aurori, Christian, Barribeau, Seth M., Bedoya-Reina, Oscar C., Brown, Mark J. F., Bull, James C., Flenniken, Michelle L., Galbraith, David A., Genersch, Elke, Gisder, Sebastian, Grosse, Ivo, Holt, Holly L., Hultmark, Dan, Lattorff, H. Michael G., Le Conte, Yves, Manfredini, Fabio, McMahon, Dino P., Moritz, Robin F. A., Nazzi, Francesco, Niño, Elina L., Nowick, Katja, van Rij, Ronald P., Paxton, Robert J., Grozinger, Christina M.
Published in BMC genomics (02.03.2017)
Published in BMC genomics (02.03.2017)
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Journal Article
A Comprehensive RNA Sequencing Analysis of the Adeno-Associated Virus (AAV) Type 2 Transcriptome Reveals Novel AAV Transcripts, Splice Variants, and Derived Proteins
Stutika, Catrin, Gogol-Döring, Andreas, Botschen, Laura, Mietzsch, Mario, Weger, Stefan, Feldkamp, Mirjam, Chen, Wei, Heilbronn, Regine
Published in Journal of virology (01.02.2016)
Published in Journal of virology (01.02.2016)
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Journal Article
Ambient temperature and genotype differentially affect developmental and phenotypic plasticity in Arabidopsis thaliana
Ibañez, Carla, Poeschl, Yvonne, Peterson, Tom, Bellstädt, Julia, Denk, Kathrin, Gogol-Döring, Andreas, Quint, Marcel, Delker, Carolin
Published in BMC plant biology (06.07.2017)
Published in BMC plant biology (06.07.2017)
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Journal Article
Adeno-Associated Virus Type 2 Wild-Type and Vector-Mediated Genomic Integration Profiles of Human Diploid Fibroblasts Analyzed by Third-Generation PacBio DNA Sequencing
Hüser, Daniela, Gogol-Döring, Andreas, Chen, Wei, Heilbronn, Regine
Published in Journal of virology (01.10.2014)
Published in Journal of virology (01.10.2014)
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Journal Article
Correction: Genomic Analysis of Sleeping Beauty Transposon Integration in Human Somatic Cells
Turchiano, Giandomenico, Latella, Maria Carmela, Döring, Andreas Gogol, Cattoglio, Claudia, Mavilio, Fulvio, Izsvák, Zsuzsanna, Ivics, Zoltán, Recchia, Alessandra
Published in PloS one (30.01.2020)
Published in PloS one (30.01.2020)
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Journal Article
Genomic Analysis of Sleeping Beauty Transposon Integration in Human Somatic Cells
Turchiano, Giandomenico, Latella, Maria Carmela, Gogol-Döring, Andreas, Cattoglio, Claudia, Mavilio, Fulvio, Izsvák, Zsuzsanna, Ivics, Zoltán, Recchia, Alessandra
Published in PloS one (12.11.2014)
Published in PloS one (12.11.2014)
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Journal Article
Comprehensive Small RNA-Seq of Adeno-Associated Virus (AAV)-Infected Human Cells Detects Patterns of Novel, Non-Coding AAV RNAs in the Absence of Cellular miRNA Regulation
Stutika, Catrin, Mietzsch, Mario, Gogol-Döring, Andreas, Weger, Stefan, Sohn, Madlen, Chen, Wei, Heilbronn, Regine
Published in PloS one (09.09.2016)
Published in PloS one (09.09.2016)
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Journal Article
Integration Preferences of Wildtype AAV-2 for Consensus Rep-Binding Sites at Numerous Loci in the Human Genome
Hüser, Daniela, Gogol-Döring, Andreas, Lutter, Timo, Weger, Stefan, Winter, Kerstin, Hammer, Eva-Maria, Cathomen, Toni, Reinert, Knut, Heilbronn, Regine
Published in PLoS pathogens (01.07.2010)
Published in PLoS pathogens (01.07.2010)
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Journal Article
Enhort: a platform for deep analysis of genomic positions
Menzel, Michael, Koch, Peter, Glasenhardt, Stefan, Gogol-Döring, Andreas
Published in PeerJ. Computer science (10.06.2019)
Published in PeerJ. Computer science (10.06.2019)
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Journal Article
Elevated virulence of an emerging viral genotype as a driver of honeybee loss
McMahon, Dino P., Natsopoulou, Myrsini E., Doublet, Vincent, Fürst, Matthias, Weging, Silvio, Brown, Mark J. F., Gogol-Döring, Andreas, Paxton, Robert J.
Published in Proceedings of the Royal Society. B, Biological sciences (29.06.2016)
Published in Proceedings of the Royal Society. B, Biological sciences (29.06.2016)
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Journal Article