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Make deep learning algorithms in computational pathology more reproducible and reusable
Wagner, Sophia J., Matek, Christian, Shetab Boushehri, Sayedali, Boxberg, Melanie, Lamm, Lorenz, Sadafi, Ario, Waibel, Dominik J. E., Marr, Carsten, Peng, Tingying
Published in Nature medicine (01.09.2022)
Published in Nature medicine (01.09.2022)
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Journal Article
Computational pathology in 2030: a Delphi study forecasting the role of AI in pathology within the next decade
Berbís, M. Alvaro, McClintock, David S., Bychkov, Andrey, Van der Laak, Jeroen, Pantanowitz, Liron, Lennerz, Jochen K., Cheng, Jerome Y., Delahunt, Brett, Egevad, Lars, Eloy, Catarina, Farris, Alton B., Fraggetta, Filippo, García del Moral, Raimundo, Hartman, Douglas J., Herrmann, Markus D., Hollemans, Eva, Iczkowski, Kenneth A., Karsan, Aly, Kriegsmann, Mark, Salama, Mohamed E., Sinard, John H., Tuthill, J. Mark, Williams, Bethany, Casado-Sánchez, César, Sánchez-Turrión, Víctor, Luna, Antonio, Aneiros-Fernández, José, Shen, Jeanne
Published in EBioMedicine (01.02.2023)
Published in EBioMedicine (01.02.2023)
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Journal Article
Computational pathology improves risk stratification of a multi-gene assay for early stage ER+ breast cancer
Chen, Yuli, Li, Haojia, Janowczyk, Andrew, Toro, Paula, Corredor, Germán, Whitney, Jon, Lu, Cheng, Koyuncu, Can F., Mokhtari, Mojgan, Buzzy, Christina, Ganesan, Shridar, Feldman, Michael D., Fu, Pingfu, Corbin, Haley, Harbhajanka, Aparna, Gilmore, Hannah, Goldstein, Lori J., Davidson, Nancy E., Desai, Sangeeta, Parmar, Vani, Madabhushi, Anant
Published in NPJ breast cancer (17.05.2023)
Published in NPJ breast cancer (17.05.2023)
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Journal Article
Abstract 2113: Discrimination of benign breast disease from normal lobules using an automated computational pathology algorithm
Degnim, Amy C., de Bel, Thomas, Sherman, Mark E., Radisky, Derek C., Winham, Stacey J., Hoskin, Tanya L., Mann, Melody L. Stallings, Frost, Marlene, Vierkant, Robert A., Broderick, Brendan T., Heinzen, Ethan P., Brahmbhatt, Rushin, Arshad, Muhammad, Vachon, Celine M., Carter, Jodi M., Denison, Lori A., Visscher, Daniel W., van der Laak, Jeroen
Published in Cancer research (Chicago, Ill.) (15.08.2020)
Published in Cancer research (Chicago, Ill.) (15.08.2020)
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Journal Article
Computational pathology in 2030: a Delphi study forecasting the role of AI in pathology within the next decadeResearch in context
M. Alvaro Berbís, David S. McClintock, Andrey Bychkov, Jeroen Van der Laak, Liron Pantanowitz, Jochen K. Lennerz, Jerome Y. Cheng, Brett Delahunt, Lars Egevad, Catarina Eloy, Alton B. Farris, III, Filippo Fraggetta, Raimundo García del Moral, Douglas J. Hartman, Markus D. Herrmann, Eva Hollemans, Kenneth A. Iczkowski, Aly Karsan, Mark Kriegsmann, Mohamed E. Salama, John H. Sinard, J. Mark Tuthill, Bethany Williams, César Casado-Sánchez, Víctor Sánchez-Turrión, Antonio Luna, José Aneiros-Fernández, Jeanne Shen
Published in EBioMedicine (01.02.2023)
Published in EBioMedicine (01.02.2023)
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Journal Article
Abstract LB-285: Computational pathology for predicting prostate cancer recurrence
Sethi, Amit, Sha, Lingdao, Deaton, Ryan J., Macias, Virgilia, Beck, Andrew H., Gann, Peter H.
Published in Cancer research (Chicago, Ill.) (01.08.2015)
Published in Cancer research (Chicago, Ill.) (01.08.2015)
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Journal Article
Annotating for Artificial Intelligence Applications in Digital Pathology: A Practical Guide for Pathologists and Researchers
Montezuma, Diana, Oliveira, Sara P., Neto, Pedro C., Oliveira, Domingos, Monteiro, Ana, Cardoso, Jaime S., Macedo-Pinto, Isabel
Published in Modern pathology (01.04.2023)
Published in Modern pathology (01.04.2023)
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Journal Article
Evaluation of Artificial Intelligence-Based Gleason Grading Algorithms “in the Wild”
Faryna, Khrystyna, Tessier, Leslie, Retamero, Juan, Bonthu, Saikiran, Samanta, Pranab, Singhal, Nitin, Kammerer-Jacquet, Solene-Florence, Radulescu, Camelia, Agosti, Vittorio, Collin, Alexandre, Farre´, Xavier, Fontugne, Jacqueline, Grobholz, Rainer, Hoogland, Agnes Marije, Moreira Leite, Katia Ramos, Oktay, Murat, Polonia, Antonio, Roy, Paromita, Salles, Paulo Guilherme, van der Kwast, Theodorus H., van Ipenburg, Jolique, van der Laak, Jeroen, Litjens, Geert
Published in Modern pathology (01.11.2024)
Published in Modern pathology (01.11.2024)
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Journal Article
Novel Scalar-on-matrix Regression for Unbalanced Feature Matrices
Rubin, Jeremy, Fan, Fan, Barisoni, Laura, Janowczyk, Andrew R., Zee, Jarcy
Published in Statistics in biosciences (05.03.2025)
Published in Statistics in biosciences (05.03.2025)
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Journal Article
Diagnosis of diabetic kidney disease in whole slide images via AI-driven quantification of pathological indicators
Liu, Xueyu, Wu, Yongfei, Chen, Yilin, Hui, Dongna, Zhang, Jianan, Hao, Fang, Lu, Yuanyue, Cheng, Hangbei, Zeng, Yue, Han, Weixia, Wang, Chen, Li, Ming, Zhou, Xiaoshuang, Zheng, Wen
Published in Computers in biology and medicine (01.11.2023)
Published in Computers in biology and medicine (01.11.2023)
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Journal Article
AI-driven glomerular morphology quantification: a novel pipeline for assessing basement membrane thickness and podocyte foot process effacement in kidney diseases
Yamashita, Michifumi, Piaseczna, Natalia, Takahashi, Akira, Kiyozawa, Daisuke, Tatsumoto, Narihito, Kaneko, Shohei, Zurek, Natalia, Gertych, Arkadiusz
Published in Computer methods and programs in biomedicine (01.08.2025)
Published in Computer methods and programs in biomedicine (01.08.2025)
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Journal Article
Recent Advances in Pathology: the 2023 Annual Review Issue of The Journal of Pathology
Jones, J Louise, Poulsom, Richard, Coates, Philip J
Published in The Journal of pathology (01.08.2023)
Published in The Journal of pathology (01.08.2023)
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Journal Article
Recent Advances in Pathology: the 2022 Annual Review Issue of The Journal of Pathology
Herrington, C Simon, Poulsom, Richard, Pillay, Nischalan, Bankhead, Peter, Coates, Philip J
Published in The Journal of pathology (01.07.2022)
Published in The Journal of pathology (01.07.2022)
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Journal Article
Predicting Grade and Patient Survival in Renal Cancer Using Machine Learning Analysis of Nucleolar Prominence
Ivanova, Elena, Fayzullin, Alexey, Grinin, Victor, Zhavoronkov, Dmitry, Ermilov, Dmitry, Balyasin, Maxim, Timakova, Anna, Bakulina, Alesia, Osmanov, Yusif, Rudenko, Ekaterina, Arutyunyan, Alexander, Parchiev, Ruslan, Shved, Nina, Astaeva, Marina, Lychagin, Aleksey, Demura, Tatiana, Timashev, Peter
Published in Cancer medicine (Malden, MA) (01.09.2025)
Published in Cancer medicine (Malden, MA) (01.09.2025)
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Journal Article
Recent Advances in Pathology: the 2020 Annual Review Issue of The Journal of Pathology
Herrington, C Simon, Poulsom, Richard, Coates, Philip J
Published in The Journal of pathology (01.04.2020)
Published in The Journal of pathology (01.04.2020)
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Journal Article
A Computational Geometry Approach for Modeling Neuronal Fiber Pathways
Shailja, S., Zhang, Angela, Manjunath, B. S.
Published in Lecture notes in computer science (01.01.2021)
Published in Lecture notes in computer science (01.01.2021)
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Book Chapter
Towards Population-Based Histologic Stain Normalization of Glioblastoma
Grenko, Caleb M., Viaene, Angela N., Nasrallah, MacLean P., Feldman, Michael D., Akbari, Hamed, Bakas, Spyridon
Published in Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries (2020)
Published in Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries (2020)
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Book Chapter