by Davydov, Eugene V., Goode, David L., Sirota, Marina, Cooper, Gregory M., Sidow, Arend, Batzoglou, Serafim
Published in PLoS computational biology (02.12.2010)

by Darling, Aaron E., Mau, Bob, Perna, Nicole T.
Published in PloS one (25.06.2010)

by Philippe, Hervé, Brinkmann, Henner, Lavrov, Dennis V., Littlewood, D. Timothy J., Manuel, Michael, Wörheide, Gert, Baurain, Denis
Published in PLoS biology (01.03.2011)

by Lemey, Philippe, Rambaut, Andrew, Drummond, Alexei J, Suchard, Marc A
Published in PLoS computational biology (01.09.2009)

by Kosiol, Carolin, Vinař, Tomáš, da Fonseca, Rute R., Hubisz, Melissa J., Bustamante, Carlos D., Nielsen, Rasmus, Siepel, Adam
Published in PLoS genetics (01.08.2008)

by Treangen, Todd J., Rocha, Eduardo P. C.
Published in PLoS genetics (01.01.2011)

by Hershberg, Ruth, Petrov, Dmitri A.
Published in PLoS genetics (01.09.2010)

by Huse, Susan M., Dethlefsen, Les, Huber, Julie A., Welch, David Mark, Relman, David A., Sogin, Mitchell L.
Published in PLoS genetics (01.11.2008)

by Schloss, Patrick D.
Published in PLoS computational biology (08.07.2010)

by Dalloul, Rami A., Long, Julie A., Zimin, Aleksey V., Aslam, Luqman, Beal, Kathryn, Ann Blomberg, Le, Bouffard, Pascal, Burt, David W., Crasta, Oswald, Crooijmans, Richard P. M. A., Cooper, Kristal, Coulombe, Roger A., De, Supriyo, Delany, Mary E., Dodgson, Jerry B., Dong, Jennifer J., Evans, Clive, Frederickson, Karin M., Flicek, Paul, Florea, Liliana, Folkerts, Otto, Groenen, Martien A. M., Harkins, Tim T., Herrero, Javier, Hoffmann, Steve, Megens, Hendrik-Jan, Jiang, Andrew, de Jong, Pieter, Kaiser, Pete, Kim, Heebal, Kim, Kyu-Won, Kim, Sungwon, Langenberger, David, Lee, Mi-Kyung, Lee, Taeheon, Mane, Shrinivasrao, Marcais, Guillaume, Marz, Manja, McElroy, Audrey P., Modise, Thero, Nefedov, Mikhail, Notredame, Cédric, Paton, Ian R., Payne, William S., Pertea, Geo, Prickett, Dennis, Puiu, Daniela, Qioa, Dan, Raineri, Emanuele, Ruffier, Magali, Salzberg, Steven L., Schatz, Michael C., Scheuring, Chantel, Schmidt, Carl J., Schroeder, Steven, Searle, Stephen M. J., Smith, Edward J., Smith, Jacqueline, Sonstegard, Tad S., Stadler, Peter F., Tafer, Hakim, Tu, Zhijian (Jake), Van Tassell, Curtis P., Vilella, Albert J., Williams, Kelly P., Yorke, James A., Zhang, Liqing, Zhang, Hong-Bin, Zhang, Xiaojun, Zhang, Yang, Reed, Kent M.
Published in PLoS biology (01.09.2010)

by Zhang, Lifang, Chia, Jer-Ming, Kumari, Sunita, Stein, Joshua C., Liu, Zhijie, Narechania, Apurva, Maher, Christopher A., Guill, Katherine, McMullen, Michael D., Ware, Doreen
Published in PLoS genetics (01.11.2009)

by Ma, Li-Jun, Ibrahim, Ashraf S., Skory, Christopher, Grabherr, Manfred G., Burger, Gertraud, Butler, Margi, Elias, Marek, Idnurm, Alexander, Lang, B. Franz, Sone, Teruo, Abe, Ayumi, Calvo, Sarah E., Corrochano, Luis M., Engels, Reinhard, Fu, Jianmin, Hansberg, Wilhelm, Kim, Jung-Mi, Kodira, Chinnappa D., Koehrsen, Michael J., Liu, Bo, Miranda-Saavedra, Diego, O'Leary, Sinead, Ortiz-Castellanos, Lucila, Poulter, Russell, Rodriguez-Romero, Julio, Ruiz-Herrera, José, Shen, Yao-Qing, Zeng, Qiandong, Galagan, James, Birren, Bruce W., Cuomo, Christina A., Wickes, Brian L.
Published in PLoS genetics (01.07.2009)

by Fedorova, Natalie D., Khaldi, Nora, Joardar, Vinita S., Maiti, Rama, Amedeo, Paolo, Anderson, Michael J., Crabtree, Jonathan, Silva, Joana C., Badger, Jonathan H., Albarraq, Ahmed, Angiuoli, Sam, Bussey, Howard, Bowyer, Paul, Cotty, Peter J., Dyer, Paul S., Egan, Amy, Galens, Kevin, Fraser-Liggett, Claire M., Haas, Brian J., Inman, Jason M., Kent, Richard, Lemieux, Sebastien, Malavazi, Iran, Orvis, Joshua, Roemer, Terry, Ronning, Catherine M., Sundaram, Jaideep P., Sutton, Granger, Turner, Geoff, Venter, J. Craig, White, Owen R., Whitty, Brett R., Youngman, Phil, Wolfe, Kenneth H., Goldman, Gustavo H., Wortman, Jennifer R., Jiang, Bo, Denning, David W., Nierman, William C.
Published in PLoS genetics (01.04.2008)

by Jaenicke, Sebastian, Ander, Christina, Bekel, Thomas, Bisdorf, Regina, Dröge, Marcus, Gartemann, Karl-Heinz, Jünemann, Sebastian, Kaiser, Olaf, Krause, Lutz, Tille, Felix, Zakrzewski, Martha, Pühler, Alfred, Schlüter, Andreas, Goesmann, Alexander
Published in PloS one (26.01.2011)

by Fischer, Will, Ganusov, Vitaly V., Giorgi, Elena E., Hraber, Peter T., Keele, Brandon F., Leitner, Thomas, Han, Cliff S., Gleasner, Cheryl D., Green, Lance, Lo, Chien-Chi, Nag, Ambarish, Wallstrom, Timothy C., Wang, Shuyi, McMichael, Andrew J., Haynes, Barton F., Hahn, Beatrice H., Perelson, Alan S., Borrow, Persephone, Shaw, George M., Bhattacharya, Tanmoy, Korber, Bette T.
Published in PloS one (20.08.2010)

by Touchon, Marie, Rocha, Eduardo P. C.
Published in PloS one (15.06.2010)

by Guo, Li, Lu, Zuhong
Published in PloS one (30.06.2010)

by Altenhoff, Adrian M., Dessimoz, Christophe
Published in PLoS computational biology (01.01.2009)

by Bradley, Robert K., Roberts, Adam, Smoot, Michael, Juvekar, Sudeep, Do, Jaeyoung, Dewey, Colin, Holmes, Ian, Pachter, Lior
Published in PLoS computational biology (01.05.2009)

by Duret, Laurent, Arndt, Peter F.
Published in PLoS genetics (01.05.2008)