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Resolving Individuals Contributing Trace Amounts of DNA to Highly Complex Mixtures Using High-Density SNP Genotyping Microarrays
Homer, Nils, Szelinger, Szabolcs, Redman, Margot, Duggan, David, Tembe, Waibhav, Muehling, Jill, Pearson, John V., Stephan, Dietrich A., Nelson, Stanley F., Craig, David W.
Published in PLoS genetics (01.08.2008)
Published in PLoS genetics (01.08.2008)
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Journal Article
Applicability of spatial transcriptional profiling to cancer research
Bassiouni, Rania, Gibbs, Lee D., Craig, David W., Carpten, John D., McEachron, Troy A.
Published in Molecular cell (15.04.2021)
Published in Molecular cell (15.04.2021)
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Journal Article
Spatial Transcriptomic Analysis of a Diverse Patient Cohort Reveals a Conserved Architecture in Triple-Negative Breast Cancer
Bassiouni, Rania, Idowu, Michael O., Gibbs, Lee D., Robila, Valentina, Grizzard, Pamela J., Webb, Michelle G., Song, Jiarong, Noriega, Ashley, Craig, David W., Carpten, John D.
Published in Cancer research (Chicago, Ill.) (04.01.2023)
Published in Cancer research (Chicago, Ill.) (04.01.2023)
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Journal Article
Whole-genome sequencing of multiple myeloma from diagnosis to plasma cell leukemia reveals genomic initiating events, evolution, and clonal tides
Egan, Jan B., Shi, Chang-Xin, Tembe, Waibhav, Christoforides, Alexis, Kurdoglu, Ahmet, Sinari, Shripad, Middha, Sumit, Asmann, Yan, Schmidt, Jessica, Braggio, Esteban, Keats, Jonathan J., Fonseca, Rafael, Bergsagel, P. Leif, Craig, David W., Carpten, John D., Stewart, A. Keith
Published in Blood (02.08.2012)
Published in Blood (02.08.2012)
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Journal Article
Transcriptome analysis provides critical answers to the “variants of uncertain significance” conundrum
Postel, Mackenzie D., Culver, Julie O., Ricker, Charité, Craig, David W.
Published in Human mutation (01.11.2022)
Published in Human mutation (01.11.2022)
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Journal Article
Genetic Control of Individual Differences in Gene-Specific Methylation in Human Brain
Zhang, Dandan, Cheng, Lijun, Badner, Judith A., Chen, Chao, Chen, Qi, Luo, Wei, Craig, David W., Redman, Margot, Gershon, Elliot S., Liu, Chunyu
Published in American journal of human genetics (12.03.2010)
Published in American journal of human genetics (12.03.2010)
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Journal Article
Small cell carcinoma of the ovary, hypercalcemic type, displays frequent inactivating germline and somatic mutations in SMARCA4
Ramos, Pilar, Karnezis, Anthony N, Craig, David W, Sekulic, Aleksandar, Russell, Megan L, Hendricks, William P D, Corneveaux, Jason J, Barrett, Michael T, Shumansky, Karey, Yang, Yidong, Shah, Sohrab P, Prentice, Leah M, Marra, Marco A, Kiefer, Jeffrey, Zismann, Victoria L, McEachron, Troy A, Salhia, Bodour, Prat, Jaime, D'Angelo, Emanuela, Clarke, Blaise A, Pressey, Joseph G, Farley, John H, Anthony, Stephen P, Roden, Richard B S, Cunliffe, Heather E, Huntsman, David G, Trent, Jeffrey M
Published in Nature genetics (01.05.2014)
Published in Nature genetics (01.05.2014)
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Journal Article
Integrated Genomic Characterization Reveals Novel, Therapeutically Relevant Drug Targets in FGFR and EGFR Pathways in Sporadic Intrahepatic Cholangiocarcinoma
Borad, Mitesh J., Champion, Mia D., Egan, Jan B., Liang, Winnie S., Fonseca, Rafael, Bryce, Alan H., McCullough, Ann E., Barrett, Michael T., Hunt, Katherine, Patel, Maitray D., Young, Scott W., Collins, Joseph M., Silva, Alvin C., Condjella, Rachel M., Block, Matthew, McWilliams, Robert R., Lazaridis, Konstantinos N., Klee, Eric W., Bible, Keith C., Harris, Pamela, Oliver, Gavin R., Bhavsar, Jaysheel D., Nair, Asha A., Middha, Sumit, Asmann, Yan, Kocher, Jean-Pierre, Schahl, Kimberly, Kipp, Benjamin R., Barr Fritcher, Emily G., Baker, Angela, Aldrich, Jessica, Kurdoglu, Ahmet, Izatt, Tyler, Christoforides, Alexis, Cherni, Irene, Nasser, Sara, Reiman, Rebecca, Phillips, Lori, McDonald, Jackie, Adkins, Jonathan, Mastrian, Stephen D., Placek, Pamela, Watanabe, Aprill T., LoBello, Janine, Han, Haiyong, Von Hoff, Daniel, Craig, David W., Stewart, A. Keith, Carpten, John D.
Published in PLoS genetics (01.02.2014)
Published in PLoS genetics (01.02.2014)
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Journal Article
Enrichment of PI3K-AKT–mTOR Pathway Activation in Hepatic Metastases from Breast Cancer
Pierobon, Mariaelena, Ramos, Corinne, Wong, Shukmei, Hodge, K. Alex, Aldrich, Jessica, Byron, Sara, Anthony, Stephen P., Robert, Nicholas J., Northfelt, Donald W., Jahanzeb, Mohammad, Vocila, Linda, Wulfkuhle, Julia, Gambara, Guido, Gallagher, Rosa I., Dunetz, Bryant, Hoke, Nicholas, Dong, Ting, Craig, David W., Cristofanilli, Massimo, Leyland-Jones, Brian, Liotta, Lance A., O'Shaughnessy, Joyce A., Carpten, John D., Petricoin, Emanuel F.
Published in Clinical cancer research (15.08.2017)
Published in Clinical cancer research (15.08.2017)
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Journal Article
Toward precision medicine in glioblastoma: the promise and the challenges
Prados, Michael D., Byron, Sara A., Tran, Nhan L., Phillips, Joanna J., Molinaro, Annette M., Ligon, Keith L., Wen, Patrick Y., Kuhn, John G., Mellinghoff, Ingo K., de Groot, John F., Colman, Howard, Cloughesy, Timothy F., Chang, Susan M., Ryken, Timothy C., Tembe, Waibhav D., Kiefer, Jeffrey A., Berens, Michael E., Craig, David W., Carpten, John D., Trent, Jeffrey M.
Published in Neuro-oncology (Charlottesville, Va.) (01.08.2015)
Published in Neuro-oncology (Charlottesville, Va.) (01.08.2015)
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Journal Article
Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas
Webb, Michelle G., Chow, Frances, McCullough, Carmel G., Zhang, Bohan, Lee, John J. Y., Bassiouni, Rania, Garrett, Norman E., Hurth, Kyle, Carpten, John D., Zada, Gabriel, Craig, David W.
Published in Nature communications (13.06.2025)
Published in Nature communications (13.06.2025)
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Journal Article
Whole genome association study of brain-wide imaging phenotypes for identifying quantitative trait loci in MCI and AD: A study of the ADNI cohort
Shen, Li, Kim, Sungeun, Risacher, Shannon L., Nho, Kwangsik, Swaminathan, Shanker, West, John D., Foroud, Tatiana, Pankratz, Nathan, Moore, Jason H., Sloan, Chantel D., Huentelman, Matthew J., Craig, David W., DeChairo, Bryan M., Potkin, Steven G., Jack, Clifford R., Weiner, Michael W., Saykin, Andrew J.
Published in NeuroImage (Orlando, Fla.) (15.11.2010)
Published in NeuroImage (Orlando, Fla.) (15.11.2010)
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Journal Article
Multi-modality machine learning predicting Parkinson’s disease
Makarious, Mary B., Leonard, Hampton L., Vitale, Dan, Iwaki, Hirotaka, Sargent, Lana, Dadu, Anant, Violich, Ivo, Hutchins, Elizabeth, Saffo, David, Bandres-Ciga, Sara, Kim, Jonggeol Jeff, Song, Yeajin, Maleknia, Melina, Bookman, Matt, Nojopranoto, Willy, Campbell, Roy H., Hashemi, Sayed Hadi, Botia, Juan A., Carter, John F., Craig, David W., Van Keuren-Jensen, Kendall, Morris, Huw R., Hardy, John A., Blauwendraat, Cornelis, Singleton, Andrew B., Faghri, Faraz, Nalls, Mike A.
Published in NPJ Parkinson's Disease (01.04.2022)
Published in NPJ Parkinson's Disease (01.04.2022)
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Journal Article
A survey of genetic human cortical gene expression
Myers, Amanda J, Gibbs, J Raphael, Webster, Jennifer A, Rohrer, Kristen, Zhao, Alice, Marlowe, Lauren, Kaleem, Mona, Leung, Doris, Bryden, Leslie, Nath, Priti, Zismann, Victoria L, Joshipura, Keta, Huentelman, Matthew J, Hu-Lince, Diane, Coon, Keith D, Craig, David W, Pearson, John V, Holmans, Peter, Heward, Christopher B, Reiman, Eric M, Stephan, Dietrich, Hardy, John
Published in Nature genetics (01.12.2007)
Published in Nature genetics (01.12.2007)
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Journal Article
Alzheimer's Disease Neuroimaging Initiative biomarkers as quantitative phenotypes: Genetics core aims, progress, and plans
Saykin, Andrew J, Shen, Li, Foroud, Tatiana M, Potkin, Steven G, Swaminathan, Shanker, Kim, Sungeun, Risacher, Shannon L, Nho, Kwangsik, Huentelman, Matthew J, Craig, David W, Thompson, Paul M, Stein, Jason L, Moore, Jason H, Farrer, Lindsay A, Green, Robert C, Bertram, Lars, Jack, Clifford R, Weiner, Michael W
Published in Alzheimer's & dementia (01.05.2010)
Published in Alzheimer's & dementia (01.05.2010)
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Journal Article
Small RNA Deep Sequencing Identifies a Unique miRNA Signature Released in Serum Exosomes in a Mouse Model of Sjögren's Syndrome
Kakan, Shruti Singh, Janga, Srikanth R., Cooperman, Benjamin, Craig, David W., Edman, Maria C., Okamoto, Curtis T., Hamm-Alvarez, Sarah F.
Published in Frontiers in immunology (17.07.2020)
Published in Frontiers in immunology (17.07.2020)
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Journal Article
Genetic Control of Human Brain Transcript Expression in Alzheimer Disease
Webster, Jennifer A., Gibbs, J. Raphael, Clarke, Jennifer, Ray, Monika, Zhang, Weixiong, Holmans, Peter, Rohrer, Kristen, Zhao, Alice, Marlowe, Lauren, Kaleem, Mona, McCorquodale, Donald S., Cuello, Cindy, Leung, Doris, Bryden, Leslie, Nath, Priti, Zismann, Victoria L., Joshipura, Keta, Huentelman, Matthew J., Hu-Lince, Diane, Coon, Keith D., Craig, David W., Pearson, John V., Heward, Christopher B., Reiman, Eric M., Stephan, Dietrich, Hardy, John, Myers, Amanda J.
Published in American journal of human genetics (01.04.2009)
Published in American journal of human genetics (01.04.2009)
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Journal Article
Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies
Lesch, Klaus-Peter, Timmesfeld, Nina, Renner, Tobias J., Halperin, Rebecca, Röser, Christoph, Nguyen, T. Trang, Craig, David W., Romanos, Jasmin, Heine, Monika, Meyer, Jobst, Freitag, Christine, Warnke, Andreas, Romanos, Marcel, Schäfer, Helmut, Walitza, Susanne, Reif, Andreas, Stephan, Dietrich A., Jacob, Christian
Published in Journal of Neural Transmission (01.11.2008)
Published in Journal of Neural Transmission (01.11.2008)
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Journal Article
Genome-Wide Characterization of Pancreatic Adenocarcinoma Patients Using Next Generation Sequencing
Liang, Winnie S., Craig, David W., Carpten, John, Borad, Mitesh J., Demeure, Michael J., Weiss, Glen J., Izatt, Tyler, Sinari, Shripad, Christoforides, Alexis, Aldrich, Jessica, Kurdoglu, Ahmet, Barrett, Michael, Phillips, Lori, Benson, Hollie, Tembe, Waibhav, Braggio, Esteban, Kiefer, Jeffrey A., Legendre, Christophe, Posner, Richard, Hostetter, Galen H., Baker, Angela, Egan, Jan B., Han, Haiyong, Lake, Douglas, Stites, Edward C., Ramanathan, Ramesh K., Fonseca, Rafael, Stewart, A. Keith, Von Hoff, Daniel
Published in PloS one (10.10.2012)
Published in PloS one (10.10.2012)
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Journal Article