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Evaluation of Cross-Validation Strategies in Sequence-Based Binding Prediction Using Deep Learning
Lopez-del Rio, Angela, Nonell-Canals, Alfons, Vidal, David, Perera-Lluna, Alexandre
Published in Journal of chemical information and modeling (22.04.2019)
Published in Journal of chemical information and modeling (22.04.2019)
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Journal Article
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HLA-DR Binding Prediction and Experimental Evaluation of T-Cell Epitopes of Mycolyl Transferase 85B (Ag85B), a Major Secreted Antigen of Mycobacterium tuberculosis
Mustafa, Abu S., Abal, Adnan T., Shaban, Fatma, El-Shamy, Abdulsalam M., Amoudy, Hanady A.
Published in Medical principles and practice (01.05.2005)
Published in Medical principles and practice (01.05.2005)
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Journal Article
Introduction to the Peptide Binding Problem of Computational Immunology: New Results
Shen, Wen-Jun, Wong, Hau-San, Xiao, Quan-Wu, Guo, Xin, Smale, Stephen
Published in Foundations of computational mathematics (01.10.2014)
Published in Foundations of computational mathematics (01.10.2014)
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Journal Article
Peanut T-cell epitope discovery: Ara h 1
Ramesh, Manish, Yuenyongviwat, Araya, Konstantinou, George N., Lieberman, Jay, Pascal, Mariona, Masilamani, Madhan, Sampson, Hugh A.
Published in Journal of allergy and clinical immunology (01.06.2016)
Published in Journal of allergy and clinical immunology (01.06.2016)
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Journal Article
VKORC1 single nucleotide polymorphisms in rodents in Spain
Bermejo-Nogales, Azucena, Rodríguez Martín, José A., Coll, Julio, Navas, José M.
Published in Chemosphere (Oxford) (01.12.2022)
Published in Chemosphere (Oxford) (01.12.2022)
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Journal Article
Identification and validation of shrimp-tropomyosin specific CD4 T cell epitopes
Ravkov, Eugene V., Pavlov, Igor Y., Martins, Thomas B., Gleich, Gerald J., Wagner, Lori A., Hill, Harry R., Delgado, Julio C.
Published in Human immunology (01.12.2013)
Published in Human immunology (01.12.2013)
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Journal Article
Efficient Testing of Large Pools of Mycobacterium tuberculosis RD1 Peptides and Identification of Major Antigens and Immunodominant Peptides Recognized by Human Th1 Cells
Mustafa, Abu S, Al-Attiyah, Raja'a, Hanif, Sumaila N M, Shaban, Fatema A
Published in Clinical and Vaccine Immunology (01.06.2008)
Published in Clinical and Vaccine Immunology (01.06.2008)
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Journal Article
Enhanced In Vitro and In Vivo Potency of a T Cell Epitope in the Ebola Virus Glycoprotein Following Amino Acid Replacement at HLA-A02:01 Binding Positions
Chabot, Sylvie, Gimie, Yusra, Obeid, Karam, Kim, Jaekwan, Meseda, Clement A., Konduru, Krishnamurthy, Kaplan, Gerardo, Sheng Fowler, Li, Weir, Jerry P., Peden, Keith, Major, Marian E.
Published in Journal of virology (28.09.2022)
Published in Journal of virology (28.09.2022)
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Journal Article
CD4+ T-cell epitope prediction using antigen processing constraints
Mettu, Ramgopal R., Charles, Tysheena, Landry, Samuel J.
Published in Journal of immunological methods (01.05.2016)
Published in Journal of immunological methods (01.05.2016)
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Journal Article
Identification and validation of expressed HLA-binding breast cancer neoepitopes for potential use in individualized cancer therapy
Reimann, Hannah, Nguyen, Andrew, Sanborn, J Zachary, Vaske, Charles J, Benz, Stephen C, Niazi, Kayvan, Rabizadeh, Shahrooz, Spilman, Patricia, Mackensen, Andreas, Ruebner, Matthias, Hein, Alexander, Beckmann, Matthias W, van der Meijden, Edith D, Bausenwein, Judith, Kretschmann, Sascha, Griffioen, Marieke, Schlom, Jeffrey, Gulley, James L, Lee, Karin L, Hamilton, Duane H, Soon-Shiong, Patrick, Fasching, Peter A, Kremer, Anita N.
Published in Journal for immunotherapy of cancer (01.06.2021)
Published in Journal for immunotherapy of cancer (01.06.2021)
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Journal Article
Glaucoma-Associated CDR1 Peptide Promotes RGC Survival in Retinal Explants through Molecular Interaction with Acidic Leucine Rich Nuclear Phosphoprotein 32A (ANP32A)
Schmelter, Carsten, Fomo, Kristian Nzogang, Brueck, Alina, Perumal, Natarajan, Markowitsch, Sascha D., Govind, Gokul, Speck, Thomas, Pfeiffer, Norbert, Grus, Franz H.
Published in Biomolecules (Basel, Switzerland) (01.07.2023)
Published in Biomolecules (Basel, Switzerland) (01.07.2023)
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Journal Article
Interdisciplinary Analysis of HIV-Specific CD8+ T Cell Responses against Variant Epitopes Reveals Restricted TCR Promiscuity
Hoof, Ilka, Pérez, Carina L, Buggert, Marcus, Gustafsson, Rasmus K L, Nielsen, Morten, Lund, Ole, Karlsson, Annika C
Published in The Journal of immunology (1950) (01.05.2010)
Published in The Journal of immunology (1950) (01.05.2010)
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Journal Article
Proteogenomic Discovery of Novel Open Reading Frames With HLA Immune Presentation on Human β-Cells
Walters, Kathryn, Castro-Gutierrez, Roberto, Sarkar, Soumyadeep, Baldwin, Amber, Baker, Alexandra S., Shilleh, Ali H., Anderson, Amanda M., Nakayama, Maki, Fugman, Tim, Nakayasu, Ernesto S., Mukherjee, Neelanjan, Russ, Holger A.
Published in Diabetes (New York, N.Y.) (02.09.2025)
Published in Diabetes (New York, N.Y.) (02.09.2025)
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Journal Article