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Machine learning in chemoinformatics and drug discovery
Lo, Yu-Chen, Rensi, Stefano E., Torng, Wen, Altman, Russ B.
Published in Drug discovery today (01.08.2018)
Published in Drug discovery today (01.08.2018)
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Journal Article
Informatics confronts drug–drug interactions
Percha, Bethany, Altman, Russ B.
Published in Trends in pharmacological sciences (Regular ed.) (01.03.2013)
Published in Trends in pharmacological sciences (Regular ed.) (01.03.2013)
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Journal Article
Protein sequence design with a learned potential
Anand, Namrata, Eguchi, Raphael, Mathews, Irimpan I., Perez, Carla P., Derry, Alexander, Altman, Russ B., Huang, Po-Ssu
Published in Nature communications (08.02.2022)
Published in Nature communications (08.02.2022)
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Journal Article
Multilingual translation for zero-shot biomedical classification using BioTranslator
Xu, Hanwen, Woicik, Addie, Poon, Hoifung, Altman, Russ B., Wang, Sheng
Published in Nature communications (10.02.2023)
Published in Nature communications (10.02.2023)
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Journal Article
Predicting HLA class II antigen presentation through integrated deep learning
Chen, Binbin, Khodadoust, Michael S., Olsson, Niclas, Wagar, Lisa E., Fast, Ethan, Liu, Chih Long, Muftuoglu, Yagmur, Sworder, Brian J., Diehn, Maximilian, Levy, Ronald, Davis, Mark M., Elias, Joshua E., Altman, Russ B., Alizadeh, Ash A.
Published in Nature biotechnology (01.11.2019)
Published in Nature biotechnology (01.11.2019)
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Journal Article
Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways
Kohlhoff, Kai J., Shukla, Diwakar, Lawrenz, Morgan, Bowman, Gregory R., Konerding, David E., Belov, Dan, Altman, Russ B., Pande, Vijay S.
Published in Nature chemistry (01.01.2014)
Published in Nature chemistry (01.01.2014)
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Journal Article
Classifying non-small cell lung cancer types and transcriptomic subtypes using convolutional neural networks
Yu, Kun-Hsing, Wang, Feiran, Berry, Gerald J, Ré, Christopher, Altman, Russ B, Snyder, Michael, Kohane, Isaac S
Published in Journal of the American Medical Informatics Association : JAMIA (01.05.2020)
Published in Journal of the American Medical Informatics Association : JAMIA (01.05.2020)
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Journal Article
A deep learning framework to predict binding preference of RNA constituents on protein surface
Lam, Jordy Homing, Li, Yu, Zhu, Lizhe, Umarov, Ramzan, Jiang, Hanlun, Héliou, Amélie, Sheong, Fu Kit, Liu, Tianyun, Long, Yongkang, Li, Yunfei, Fang, Liang, Altman, Russ B., Chen, Wei, Huang, Xuhui, Gao, Xin
Published in Nature communications (30.10.2019)
Published in Nature communications (30.10.2019)
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Journal Article
Leveraging the Cell Ontology to classify unseen cell types
Wang, Sheng, Pisco, Angela Oliveira, McGeever, Aaron, Brbic, Maria, Zitnik, Marinka, Darmanis, Spyros, Leskovec, Jure, Karkanias, Jim, Altman, Russ B.
Published in Nature communications (21.09.2021)
Published in Nature communications (21.09.2021)
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Journal Article
Quantifying the Severity of Adverse Drug Reactions Using Social Media: Network Analysis
Lavertu, Adam, Hamamsy, Tymor, Altman, Russ B
Published in Journal of medical Internet research (21.10.2021)
Published in Journal of medical Internet research (21.10.2021)
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Journal Article
Construction of disease-specific cytokine profiles by associating disease genes with immune responses
Liu, Tianyun, Wang, Shiyin, Wornow, Michael, Altman, Russ B.
Published in PLoS computational biology (01.04.2022)
Published in PLoS computational biology (01.04.2022)
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Journal Article
Bioinformatics challenges for personalized medicine
Fernald, Guy Haskin, Capriotti, Emidio, Daneshjou, Roxana, Karczewski, Konrad J., Altman, Russ B.
Published in Bioinformatics (01.07.2011)
Published in Bioinformatics (01.07.2011)
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Journal Article