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PEPMatch: a tool to identify short peptide sequence matches in large sets of proteins
Marrama, Daniel, Chronister, William D., Westernberg, Luise, Vita, Randi, Koşaloğlu-Yalçın, Zeynep, Sette, Alessandro, Nielsen, Morten, Greenbaum, Jason A., Peters, Bjoern
Published in BMC bioinformatics (18.12.2023)
Published in BMC bioinformatics (18.12.2023)
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Journal Article
Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm
Zunder, Eli R, Finck, Rachel, Behbehani, Gregory K, Amir, El-ad D, Krishnaswamy, Smita, Gonzalez, Veronica D, Lorang, Cynthia G, Bjornson, Zach, Spitzer, Matthew H, Bodenmiller, Bernd, Fantl, Wendy J, Pe'er, Dana, Nolan, Garry P
Published in Nature protocols (01.02.2015)
Published in Nature protocols (01.02.2015)
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Journal Article
Pytrf: a python package for finding tandem repeats from genomic sequences
Du, Lianming, Sun, Dalin, Chen, Jiahao, Zhou, Xinyi, Zhao, Kelei, Zeng, Qianglin, Yang, Nan
Published in BMC bioinformatics (04.06.2025)
Published in BMC bioinformatics (04.06.2025)
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Journal Article
PASTA: Python Algorithms for Searching Transition stAtes
Kundu, Sudipta, Bhattacharjee, Satadeep, Lee, Seung-Cheol, Jain, Manish
Published in Computer physics communications (01.12.2018)
Published in Computer physics communications (01.12.2018)
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Journal Article
Performance improvement of dynamic PV array under partial shade conditions using M 2 algorithm
Manjunath, Matam, Venugopal Reddy, Barry, Lehman, Brad
Published in IET renewable power generation (10.06.2019)
Published in IET renewable power generation (10.06.2019)
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Journal Article
FLOW-MAP: a graph-based, force-directed layout algorithm for trajectory mapping in single-cell time course datasets
Ko, Melissa E., Williams, Corey M., Fread, Kristen I., Goggin, Sarah M., Rustagi, Rohit S., Fragiadakis, Gabriela K., Nolan, Garry P., Zunder, Eli R.
Published in Nature protocols (01.02.2020)
Published in Nature protocols (01.02.2020)
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Journal Article
Robust optical flow algorithm for general single cell segmentation
Robitaille, Michael C., Byers, Jeff M., Christodoulides, Joseph A., Raphael, Marc P.
Published in PloS one (14.01.2022)
Published in PloS one (14.01.2022)
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Journal Article
Comprehensive Assessment and Standardization of Solid Phase Multiplex‐Bead Arrays for the Detection of Antibodies to HLA
Reed, E. F., Rao, P., Zhang, Z., Gebel, H., Bray, R. A., Guleria, I., Lunz, J., Mohanakumar, T., Nickerson, P., Tambur, A. R., Zeevi, A., Heeger, P. S., Gjertson, D.
Published in American journal of transplantation (01.07.2013)
Published in American journal of transplantation (01.07.2013)
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Journal Article
On Linear Cellular Automata
Kulikov, V. R., Kytmanov, A. A., Poroshin, A. O., Timofeev, I. V., Fedchenko, D. P.
Published in Programming and computer software (01.02.2024)
Published in Programming and computer software (01.02.2024)
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Journal Article
A Severity Assessment of Python Code Smells
Gupta, Aakanshi, Gandhi, Rashmi, Jatana, Nishtha, Jatain, Divya, Panda, Sandeep Kumar, Ramesh, Janjhyam Venkata Naga
Published in IEEE access (01.01.2023)
Published in IEEE access (01.01.2023)
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Journal Article
text ^\text \text : An Accurate Array Response Control Algorithm for Pattern Synthesis
Zhang, Xuejing, He, Zishu, Liao, Bin, Zhang, Xuepan, Cheng, Ziyang, Lu, Yanxi
Published in IEEE transactions on signal processing (01.04.2017)
Published in IEEE transactions on signal processing (01.04.2017)
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Journal Article
mzapy: An Open-Source Python Library Enabling Efficient Extraction and Processing of Ion Mobility Spectrometry-Mass Spectrometry Data in the MZA File Format
Ross, Dylan, Bilbao, Aivett, Lee, Joon-Yong, Zheng, Xueyun
Published in Analytical chemistry (Washington) (27.06.2023)
Published in Analytical chemistry (Washington) (27.06.2023)
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Journal Article
Comparative Analysis of AI Models for Python Code Generation: A HumanEval Benchmark Study
Bayram, Ali, Menekse Dalveren, Gonca Gokce, Derawi, Mohammad
Published in Applied sciences (10.09.2025)
Published in Applied sciences (10.09.2025)
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Journal Article
No Need to Lift a Finger Anymore? Assessing the Quality of Code Generation by ChatGPT
Liu, Zhijie, Tang, Yutian, Luo, Xiapu, Zhou, Yuming, Zhang, Liang Feng
Published in IEEE transactions on software engineering (01.06.2024)
Published in IEEE transactions on software engineering (01.06.2024)
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Journal Article
Sb 2 S 3 -Based Dynamically Tuned Color Filter Array via Genetic Algorithm
Wei, Xueling, Nong, Jie, Zhang, Yiyi, Ma, Hansi, Huang, Rixing, Yuan, Zhenkun, Zhang, Zhenfu, Zhang, Zhenrong, Yang, Junbo
Published in Nanomaterials (Basel, Switzerland) (24.04.2023)
Published in Nanomaterials (Basel, Switzerland) (24.04.2023)
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Journal Article
Towards understanding bugs in Python interpreters
Liu, Di, Feng, Yang, Yan, Yanyan, Xu, Baowen
Published in Empirical software engineering : an international journal (01.01.2023)
Published in Empirical software engineering : an international journal (01.01.2023)
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Journal Article
IntelELM: A python framework for intelligent metaheuristic-based extreme learning machine
Van Thieu, Nguyen, Houssein, Essam H., Oliva, Diego, Hung, Nguyen Duy
Published in Neurocomputing (Amsterdam) (14.02.2025)
Published in Neurocomputing (Amsterdam) (14.02.2025)
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Journal Article