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    GRAPE for fast and scalable graph processing and random-walk-based embedding
                                      
                                            Cappelletti, Luca,                              Fontana, Tommaso,                              Casiraghi, Elena,                              Ravanmehr, Vida,                              Callahan, Tiffany J,                              Cano, Carlos,                              Joachimiak, Marcin P,                              Mungall, Christopher J,                              Robinson, Peter N,                              Reese, Justin,                              Valentini, Giorgio                              
Published in Nature Computational Science (01.06.2023)
                   
      
      
                                                  Published in Nature Computational Science (01.06.2023)
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              Journal Article
          
              
          Data on Cu- and Ni-Si-Mn-rich solute clustering in a neutron irradiated austenitic stainless steel
                                      
                                            Levine, Samara M.,                              Pareige, Cristelle,                              Jiao, Zhijie,                              Edmondson, Philip D.,                              Was, Gary S.,                              Zinkle, Steven J.,                              Bhattacharya, Arunodaya                              
Published in Data in brief (01.06.2022)
                   
      
      
                                                  Published in Data in brief (01.06.2022)
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              Journal Article
          
              
          Segmentation, tracking and cell cycle analysis of live-cell imaging data with Cell-ACDC
                                      
                                            Padovani, Francesco,                              Mairhörmann, Benedikt,                              Falter-Braun, Pascal,                              Lengefeld, Jette,                              Schmoller, Kurt M.                              
Published in BMC biology (05.08.2022)
                   
      
      
                                                  Published in BMC biology (05.08.2022)
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              Journal Article
          
              
          Nonparametric IPSS: fast, flexible feature selection with false discovery control
                                      
                                            Melikechi, Omar,                              Dunson, David B,                              Miller, Jeffrey W                              
Published in Bioinformatics (Oxford, England) (13.05.2025)
                   
      
      
                                                  Published in Bioinformatics (Oxford, England) (13.05.2025)
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              Journal Article
          
              
          SciPy 1.0: fundamental algorithms for scientific computing in Python
                                      
                                            Virtanen, Pauli,                              Gommers, Ralf,                              Oliphant, Travis E.,                              Haberland, Matt,                              Reddy, Tyler,                              Cournapeau, David,                              Burovski, Evgeni,                              Peterson, Pearu,                              Weckesser, Warren,                              Bright, Jonathan,                              van der Walt, Stéfan J.,                              Brett, Matthew,                              Wilson, Joshua,                              Millman, K. Jarrod,                              Mayorov, Nikolay,                              Nelson, Andrew R. J.,                              Jones, Eric,                              Kern, Robert,                              Larson, Eric,                              Carey, C J,                              Polat, İlhan,                              Feng, Yu,                              Moore, Eric W.,                              VanderPlas, Jake,                              Laxalde, Denis,                              Perktold, Josef,                              Cimrman, Robert,                              Henriksen, Ian,                              Quintero, E. A.,                              Harris, Charles R.,                              Archibald, Anne M.,                              Ribeiro, Antônio H.,                              Pedregosa, Fabian,                              van Mulbregt, Paul                              
Published in Nature methods (01.03.2020)
                   
      
      
                                                  Published in Nature methods (01.03.2020)
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              Journal Article
          
              
          A framework to create customised LHC analyses within CheckMATE
                                      
                                            Kim, Jong Soo,                              Schmeier, Daniel,                              Tattersall, Jamie,                              Rolbiecki, Krzysztof                              
Published in Computer physics communications (01.11.2015)
                   
      
      
                                                  Published in Computer physics communications (01.11.2015)
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              Journal Article
          
              
          pyOpenMS: A Python-based interface to the OpenMS mass-spectrometry algorithm library
                                      
                                            Röst, Hannes L.,                              Schmitt, Uwe,                              Aebersold, Ruedi,                              Malmström, Lars                              
Published in Proteomics (Weinheim) (01.01.2014)
                   
      
      
                                                  Published in Proteomics (Weinheim) (01.01.2014)
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              Journal Article
          
              
          A structural health monitoring Python code to detect small changes in frequencies
                                      
                                            Nedelcu, Dorian,                              Gillich, Gilbert-Rainer                              
Published in Mechanical systems and signal processing (15.01.2021)
                   
      
      
                                                  Published in Mechanical systems and signal processing (15.01.2021)
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              Journal Article
          
              
          DockerizeMe: Automatic Inference of Environment Dependencies for Python Code Snippets
                                      
                                            Horton, Eric,                              Parnin, Chris                              
Published in Proceedings / International Conference on Software Engineering (01.05.2019)
                   
      
      
                                                  Published in Proceedings / International Conference on Software Engineering (01.05.2019)
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              Conference Proceeding
          
              
          NeuroPycon: An open-source python toolbox for fast multi-modal and reproducible brain connectivity pipelines
                                      
                                            Meunier, David,                              Pascarella, Annalisa,                              Altukhov, Dmitrii,                              Jas, Mainak,                              Combrisson, Etienne,                              Lajnef, Tarek,                              Bertrand-Dubois, Daphné,                              Hadid, Vanessa,                              Alamian, Golnoush,                              Alves, Jordan,                              Barlaam, Fanny,                              Saive, Anne-Lise,                              Dehgan, Arthur,                              Jerbi, Karim                              
Published in NeuroImage (Orlando, Fla.) (01.10.2020)
                   
      
      
                                                  Published in NeuroImage (Orlando, Fla.) (01.10.2020)
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              Journal Article