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    GRAPE for fast and scalable graph processing and random-walk-based embedding
                                      
                                            Cappelletti, Luca,                              Fontana, Tommaso,                              Casiraghi, Elena,                              Ravanmehr, Vida,                              Callahan, Tiffany J,                              Cano, Carlos,                              Joachimiak, Marcin P,                              Mungall, Christopher J,                              Robinson, Peter N,                              Reese, Justin,                              Valentini, Giorgio                              
Published in Nature Computational Science (01.06.2023)
                   
      
      
                                                  Published in Nature Computational Science (01.06.2023)
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          MetPy: A Meteorological Python Library for Data Analysis and Visualization
                                      
                                            May, Ryan M.,                              Goebbert, Kevin H.,                              Thielen, Jonathan E.,                              Leeman, John R.,                              Camron, M. Drew,                              Bruick, Zachary,                              Bruning, Eric C.,                              Manser, Russell P.,                              Arms, Sean C.,                              Marsh, Patrick T.                              
Published in Bulletin of the American Meteorological Society (01.10.2022)
                   
      
      
                                                  Published in Bulletin of the American Meteorological Society (01.10.2022)
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          Data on Cu- and Ni-Si-Mn-rich solute clustering in a neutron irradiated austenitic stainless steel
                                      
                                            Levine, Samara M.,                              Pareige, Cristelle,                              Jiao, Zhijie,                              Edmondson, Philip D.,                              Was, Gary S.,                              Zinkle, Steven J.,                              Bhattacharya, Arunodaya                              
Published in Data in brief (01.06.2022)
                   
      
      
                                                  Published in Data in brief (01.06.2022)
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          Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
                                      
                                            Johnson, Jeanette A. I.,                              Tsang, Ashley P.,                              Mitchell, Jacob T.,                              Zhou, David L.,                              Bowden, Julia,                              Davis-Marcisak, Emily,                              Sherman, Thomas,                              Liefeld, Ted,                              Loth, Melanie,                              Goff, Loyal A.,                              Zimmerman, Jacquelyn W.,                              Kinny-Köster, Ben,                              Jaffee, Elizabeth M.,                              Tamayo, Pablo,                              Mesirov, Jill P.,                              Reich, Michael,                              Fertig, Elana J.,                              Stein-O’Brien, Genevieve L.                              
Published in Nature protocols (01.12.2023)
                   
      
      
                                                  Published in Nature protocols (01.12.2023)
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          Segmentation, tracking and cell cycle analysis of live-cell imaging data with Cell-ACDC
                                      
                                            Padovani, Francesco,                              Mairhörmann, Benedikt,                              Falter-Braun, Pascal,                              Lengefeld, Jette,                              Schmoller, Kurt M.                              
Published in BMC biology (05.08.2022)
                   
      
      
                                                  Published in BMC biology (05.08.2022)
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          SciPy 1.0: fundamental algorithms for scientific computing in Python
                                      
                                            Virtanen, Pauli,                              Gommers, Ralf,                              Oliphant, Travis E.,                              Haberland, Matt,                              Reddy, Tyler,                              Cournapeau, David,                              Burovski, Evgeni,                              Peterson, Pearu,                              Weckesser, Warren,                              Bright, Jonathan,                              van der Walt, Stéfan J.,                              Brett, Matthew,                              Wilson, Joshua,                              Millman, K. Jarrod,                              Mayorov, Nikolay,                              Nelson, Andrew R. J.,                              Jones, Eric,                              Kern, Robert,                              Larson, Eric,                              Carey, C J,                              Polat, İlhan,                              Feng, Yu,                              Moore, Eric W.,                              VanderPlas, Jake,                              Laxalde, Denis,                              Perktold, Josef,                              Cimrman, Robert,                              Henriksen, Ian,                              Quintero, E. A.,                              Harris, Charles R.,                              Archibald, Anne M.,                              Ribeiro, Antônio H.,                              Pedregosa, Fabian,                              van Mulbregt, Paul                              
Published in Nature methods (01.03.2020)
                   
      
      
                                                  Published in Nature methods (01.03.2020)
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          Nonparametric IPSS: fast, flexible feature selection with false discovery control
                                      
                                            Melikechi, Omar,                              Dunson, David B,                              Miller, Jeffrey W                              
Published in Bioinformatics (Oxford, England) (13.05.2025)
                   
      
      
                                                  Published in Bioinformatics (Oxford, England) (13.05.2025)
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          ImputAccur: fast and user-friendly calculation of genotype-imputation accuracy-measures
                                      
                                            Thormann, Kolja A.,                              Tozzi, Viola,                              Starke, Paula,                              Bickeböller, Heike,                              Baum, Marcus,                              Rosenberger, Albert                              
Published in BMC bioinformatics (04.08.2022)
                   
      
      
                                                  Published in BMC bioinformatics (04.08.2022)
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