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    GPU-DAEMON: GPU algorithm design, data management & optimization template for array based big omics data
                                      
                                            Awan, Muaaz Gul,                              Eslami, Taban,                              Saeed, Fahad                              
Published in Computers in biology and medicine (01.10.2018)
                   
      
      
                                                  Published in Computers in biology and medicine (01.10.2018)
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          PyLog: An Algorithm-Centric Python-Based FPGA Programming and Synthesis Flow
                                      
                                            Huang, Sitao,                              Wu, Kun,                              Jeong, Hyunmin,                              Wang, Chengyue,                              Chen, Deming,                              Hwu, Wen-Mei                              
Published in IEEE transactions on computers (01.12.2021)
                   
      
      
                                                  Published in IEEE transactions on computers (01.12.2021)
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          Correct orchestration of federated learning generic algorithms: Python translation to CSP and verification by PAT
                                      
                                            Djukic, Miodrag,                              Prokić, Ivan,                              Popovic, Miroslav,                              Ghilezan, Silvia,                              Popovic, Marko,                              Prokić, Simona                              
Published in International journal on software tools for technology transfer (01.02.2025)
                   
      
      
                                                  Published in International journal on software tools for technology transfer (01.02.2025)
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          MetPy: A Meteorological Python Library for Data Analysis and Visualization
                                      
                                            May, Ryan M.,                              Goebbert, Kevin H.,                              Thielen, Jonathan E.,                              Leeman, John R.,                              Camron, M. Drew,                              Bruick, Zachary,                              Bruning, Eric C.,                              Manser, Russell P.,                              Arms, Sean C.,                              Marsh, Patrick T.                              
Published in Bulletin of the American Meteorological Society (01.10.2022)
                   
      
      
                                                  Published in Bulletin of the American Meteorological Society (01.10.2022)
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          Binary Tree-based Generic Demosaicking Algorithm for Multispectral Filter Arrays
                                      
                                            Lidan Miao,                              Hairong Qi,                              Ramanath, R.,                              Snyder, W.E.                              
Published in IEEE transactions on image processing (01.11.2006)
                   
      
      
                                                  Published in IEEE transactions on image processing (01.11.2006)
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          PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
                                      
                                            Singh, Gursimran,                              Chharia, Aviral,                              Upadhyay, Rahul,                              Kumar, Vinay,                              Longo, Luca                              
Published in PloS one (06.08.2025)
                   
      
      
                                                  Published in PloS one (06.08.2025)
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          scTPC: a novel semisupervised deep clustering model for scRNA-seq data
                                      
                                            Qiu, Yushan,                              Yang, Lingfei,                              Jiang, Hao,                              Zou, Quan                              
Published in Bioinformatics (Oxford, England) (02.05.2024)
                   
      
      
                                                  Published in Bioinformatics (Oxford, England) (02.05.2024)
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          pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods
                                      
                                            Behdenna, Abdelkader,                              Colange, Maximilien,                              Haziza, Julien,                              Gema, Aryo,                              Appé, Guillaume,                              Azencott, Chloé-Agathe,                              Nordor, Akpéli                              
Published in BMC bioinformatics (07.12.2023)
                   
      
      
                                                  Published in BMC bioinformatics (07.12.2023)
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          Bridging Python to Silicon: The SODA Toolchain
                                      
                                            Agostini, Nicolas Bohm,                              Curzel, Serena,                              Zhang, Jeff Jun,                              Limaye, Ankur,                              Tan, Cheng,                              Amatya, Vinay,                              Minutoli, Marco,                              Castellana, Vito Giovanni,                              Manzano, Joseph,                              Brooks, David,                              Wei, Gu-Yeon,                              Tumeo, Antonino                              
Published in IEEE MICRO (01.09.2022)
                   
      
      
                                                  Published in IEEE MICRO (01.09.2022)
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          An Introduction to Programming for Bioscientists: A Python-Based Primer
                                      
                                            Ekmekci, Berk,                              McAnany, Charles E.,                              Mura, Cameron                              
Published in PLoS computational biology (01.06.2016)
                   
      
      
                                                  Published in PLoS computational biology (01.06.2016)
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          Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data
                                      
                                            ElAbd, Hesham,                              Degenhardt, Frauke,                              Koudelka, Tomas,                              Kamps, Ann-Kristin,                              Tholey, Andreas,                              Bacher, Petra,                              Lenz, Tobias L.,                              Franke, Andre,                              Wendorff, Mareike                              
Published in BMC bioinformatics (17.08.2021)
                   
      
      
                                                  Published in BMC bioinformatics (17.08.2021)
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          Generic Non-recursive Suffix Array Construction
                                      
                                            Olbrich, Jannik,                              Ohlebusch, Enno,                              Büchler, Thomas                              
Published in ACM transactions on algorithms (13.04.2024)
                   
      
      
                                                  Published in ACM transactions on algorithms (13.04.2024)
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          New Python-based methods for data processing
                                      
                                            Sauter, Nicholas K.,                              Hattne, Johan,                              Grosse-Kunstleve, Ralf W.,                              Echols, Nathaniel                              
Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
                   
      
      
                                                  Published in Acta crystallographica. Section D, Biological crystallography. (01.07.2013)
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